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Genome
Coordinate Discrepancy The genome coordinates for mouse SNPs are derived from a different NCBI build of the mouse genome than are the genome coordinates for MGI genes. (see details). |
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Symbol Name ID |
Pgk1 phosphoglycerate kinase 1 MGI:97555 |
| SNP ID (dbSNP Build 128) | Map Position (NCBI Build 37) |  | Gene : dbSNP Function Class | Assays (ss) | Variation Type |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | Allele Summary (all strains) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| rs29096670 MPD | dbSNP | MGI SNP Detail | ChrX:103380521 | f | Pgk1 : Locus-Region | 1 | SNP | C | C | C | C | C | T | C | C | C | C | C | C | C | C/T | |||||||||
| rs29096669 MPD | dbSNP | MGI SNP Detail | ChrX:103380781 | f | Pgk1 : Locus-Region | 1 | SNP | C | C | C | C | C | T | C | C | C | C | C | C | C/T | ||||||||||
| rs29096668 MPD | dbSNP | MGI SNP Detail | ChrX:103380889 | f | Pgk1 : Locus-Region | 1 | SNP | G | G | G | G | T | G | G | G | G | G | G | G | G/T | ||||||||||
| rs29096667 MPD | dbSNP | MGI SNP Detail | ChrX:103380910 | f | Pgk1 : Locus-Region | 1 | SNP | C | C | C | C | C | C | C | C | C | C | T | C | C/T | ||||||||||
| rs29096666 MPD | dbSNP | MGI SNP Detail | ChrX:103380934 | f | Pgk1 : Locus-Region | 1 | SNP | G | G | G | G | G | A | G | G | G | G | G | G | G | A/G | |||||||||
| rs3090492 MPD | dbSNP | MGI SNP Detail | ChrX:103381180 | f | Pgk1 : Locus-Region | 1 | SNP | G | T | T | T | T | T | T | T | G/T | ||||||||||||||
| rs29096665 MPD | dbSNP | MGI SNP Detail | ChrX:103381564 | f | Pgk1 : Locus-Region | 1 | SNP | C | C | C | C | C | A | C | C | C | C | C | C | C | A/C | |||||||||
| rs29096664 MPD | dbSNP | MGI SNP Detail | ChrX:103381596 | f | Pgk1 : Locus-Region | 1 | SNP | C | C | C | C | C | T | C | C | C | C | C | C | C | C/T | |||||||||
| rs29096263 MPD | dbSNP | MGI SNP Detail | ChrX:103381803 | f | Pgk1 : Locus-Region | 1 | SNP | C | C | C | C | C | T | C | C | C | C | C | C | C/T | ||||||||||
| rs29096262 MPD | dbSNP | MGI SNP Detail | ChrX:103382396 | f | Pgk1 : Locus-Region | 1 | SNP | C | C | C | C | C | T | C | C | C | C | C | C | C | C/T | |||||||||
| rs29096261 MPD | dbSNP | MGI SNP Detail | ChrX:103383227 | f | Pgk1 : Intron | 1 | SNP | T | T | T | T | T | C | T | T | T | T | T | T | C/T | ||||||||||
| rs29096260 MPD | dbSNP | MGI SNP Detail | ChrX:103383775 | f | Pgk1 : Intron | 1 | SNP | T | T | T | T | T | C | T | T | C | T | T | T | T | C | T | C/T | |||||||
| rs29096259 MPD | dbSNP | MGI SNP Detail | ChrX:103383869 | f | Pgk1 : Intron | 1 | SNP | A | A | A | A | A | G | A | A | G | A | A | A | G | G | A | A/G | |||||||
| rs29096258 MPD | dbSNP | MGI SNP Detail | ChrX:103384044 | f | Pgk1 : Intron | 1 | SNP | T | T | T | T | T | C | T | T | C | T | T | T | T | C | T | C/T | |||||||
| rs29096257 MPD | dbSNP | MGI SNP Detail | ChrX:103384131 | f | Pgk1 : Intron | 1 | SNP | T | T | T | T | T | C | T | T | T | T | T | T | C | T | C/T | ||||||||
| rs29096256 MPD | dbSNP | MGI SNP Detail | ChrX:103384166 | f | Pgk1 : Intron | 1 | SNP | C | C | C | C | C | T | C | C | T | C | C | C | C | T | C | C/T | |||||||
| rs29096255 MPD | dbSNP | MGI SNP Detail | ChrX:103384677 | f | Pgk1 : Intron | 1 | SNP | T | T | T | T | T | C | T | T | C | T | T | T | T | C | T | C/T | |||||||
| rs29096254 MPD | dbSNP | MGI SNP Detail | ChrX:103385096 | f | Pgk1 : Intron | 1 | SNP | A | A | A | A | A | G | A | A | G | A | A | A | A | A | A/G | ||||||||
| rs29095853 MPD | dbSNP | MGI SNP Detail | ChrX:103385321 | f | Pgk1 : Intron | 1 | SNP | T | T | T | T | T | C | T | T | T | T | T | T | C | T | C/T | ||||||||
| rs29095852 MPD | dbSNP | MGI SNP Detail | ChrX:103385354 | f | Pgk1 : Intron | 1 | SNP | T | T | T | T | T | T | T | T | G | T | T | T | T | G | T | G/T | |||||||
| rs29095851 MPD | dbSNP | MGI SNP Detail | ChrX:103385405 | f | Pgk1 : Intron | 1 | SNP | C | C | C | C | C | C | C | C | C | T | C | C/T | |||||||||||
| rs29095850 MPD | dbSNP | MGI SNP Detail | ChrX:103385764 | f | Pgk1 : Intron | 1 | SNP | T | T | T | T | T | C | T | T | T | T | T | T | T | T | T | C/T | |||||||
| rs29095849 MPD | dbSNP | MGI SNP Detail | ChrX:103385848 | f | Pgk1 : Intron | 1 | SNP | C | C | C | C | C | C | C | C | T | C | C | C | C | T | C | C/T | |||||||
| rs29095848 MPD | dbSNP | MGI SNP Detail | ChrX:103386629 | f | Pgk1 : Intron | 1 | SNP | A | A | A | A | A | G | A | A | A | A | A | A | A | A | A | A/G | |||||||
| rs29095847 MPD | dbSNP | MGI SNP Detail | ChrX:103387122 | f | Pgk1 : Intron | 1 | SNP | C | C | C | C | C | T | C | C | C | C | C | C | T | C | C/T | ||||||||
| SNP ID (dbSNP Build 128) | Map Position (NCBI Build 37) | | Gene : dbSNP Function Class | Assays (ss) | Variation Type | | | | | | | | | | | | | | | | | | | | | | | Allele Summary (all strains) |
| rs29095846 MPD | dbSNP | MGI SNP Detail | ChrX:103387444 | f | Pgk1 : Intron | 1 | SNP | C | C | C | C | C | C | C | C | G | C | C | C | C | G | C | C/G | |||||||
| rs29095845 MPD | dbSNP | MGI SNP Detail | ChrX:103388966 | f | Pgk1 : Intron | 1 | SNP | C | C | C | C | C | T | C | C | T | C | C | C | C | T | C | C/T | |||||||
| rs29095844 MPD | dbSNP | MGI SNP Detail | ChrX:103389007 | f | Pgk1 : Intron | 1 | SNP | A | A | A | A | G | A | A | G | A | A | A | A | G | A | A/G | ||||||||
| rs29095413 MPD | dbSNP | MGI SNP Detail | ChrX:103389034 | f | Pgk1 : Intron | 1 | SNP | C | C | C | C | C | T | C | C | C | C | C | C | C | C | C | C/T | |||||||
| rs29095412 MPD | dbSNP | MGI SNP Detail | ChrX:103389575 | f | Pgk1 : Intron | 1 | SNP | T | T | T | T | T | C | T | T | C | T | T | T | T | C | T | C/T | |||||||
| rs29095411 MPD | dbSNP | MGI SNP Detail | ChrX:103389719 | f | Pgk1 : Coding-Synonymous | 1 | SNP | C | C | C | C | C | T | C | C | C | C | C | C | C | C | C | C/T | |||||||
| rs29095410 MPD | dbSNP | MGI SNP Detail | ChrX:103389893 | f | Pgk1 : Intron | 1 | SNP | G | G | G | G | G | A | G | G | A | G | G | G | G | A | G | A/G | |||||||
| rs29095409 MPD | dbSNP | MGI SNP Detail | ChrX:103390618 | f | Pgk1 : Intron | 1 | SNP | A | A | A | A | A | C | A | A | A | A | A | A | C | A | A/C | ||||||||
| rs29095408 MPD | dbSNP | MGI SNP Detail | ChrX:103391294 | f | Pgk1 : Intron | 1 | SNP | T | T | T | T | T | C | T | T | C | T | T | T | T | C | T | C/T | |||||||
| rs29095407 MPD | dbSNP | MGI SNP Detail | ChrX:103391453 | f | Pgk1 : Intron | 1 | SNP | T | T | T | T | T | C | T | T | C | T | T | T | T | C | T | C/T | |||||||
| rs29095406 MPD | dbSNP | MGI SNP Detail | ChrX:103391713 | f | Pgk1 : Intron | 1 | SNP | G | G | G | G | G | C | G | G | G | G | G | G | C | G | C/G | ||||||||
| rs29095405 MPD | dbSNP | MGI SNP Detail | ChrX:103392320 | f | Pgk1 : Intron | 1 | SNP | C | C | C | C | C | T | C | C | C | C | C | C | C | C | C | C/T | |||||||
| rs29095404 MPD | dbSNP | MGI SNP Detail | ChrX:103392498 | f | Pgk1 : Intron | 1 | SNP | T | T | T | T | T | T | T | G | T | T | T | T | G | T | G/T | ||||||||
| rs29095213 MPD | dbSNP | MGI SNP Detail | ChrX:103392599 | f | Pgk1 : Intron | 1 | SNP | T | T | T | T | T | T | T | T | C | T | T | T | T | C | T | C/T | |||||||
| rs29095212 MPD | dbSNP | MGI SNP Detail | ChrX:103392629 | f | Pgk1 : Intron | 1 | SNP | C | C | C | C | C | C | C | C | T | C | C | C | C | T | C | C/T | |||||||
| rs29095211 MPD | dbSNP | MGI SNP Detail | ChrX:103393283 | f | Pgk1 : Coding-Synonymous | 1 | SNP | C | C | C | C | C | C | C | C | T | C | C | C | C | T | C | C/T | |||||||
| rs29095210 MPD | dbSNP | MGI SNP Detail | ChrX:103393365 | f | Pgk1 : Intron | 1 | SNP | G | G | G | G | G | T | G | G | G | G | G | G | G | G | G | G/T | |||||||
| rs29095209 MPD | dbSNP | MGI SNP Detail | ChrX:103393423 | f | Pgk1 : Intron | 1 | SNP | G | G | G | G | G | G | G | G | C | G | G | G | G | C | G | C/G | |||||||
| rs29095208 MPD | dbSNP | MGI SNP Detail | ChrX:103393503 | f | Pgk1 : Intron | 1 | SNP | C | C | C | C | C | T | C | C | C | C | C | C | C | C | C | C/T | |||||||
| rs29095207 MPD | dbSNP | MGI SNP Detail | ChrX:103393642 | f | Pgk1 : Intron | 1 | SNP | G | G | G | G | G | A | G | G | A | G | G | G | G | A | G | A/G | |||||||
| rs29095206 MPD | dbSNP | MGI SNP Detail | ChrX:103395421 | f | Pgk1 : Intron | 1 | SNP | A | A | A | A | C | A | C | C | C | A/C | |||||||||||||
| rs29095205 MPD | dbSNP | MGI SNP Detail | ChrX:103395881 | f | Pgk1 : Intron | 1 | SNP | A | A | A | A | G | A | A | A | A | A | A | A | A/G | ||||||||||
| rs29095204 MPD | dbSNP | MGI SNP Detail | ChrX:103395936 | f | Pgk1 : Intron | 1 | SNP | C | C | C | T | C | C | T | C | T | C/T | |||||||||||||
| rs29094983 MPD | dbSNP | MGI SNP Detail | ChrX:103396635 | f | Pgk1 : Intron | 1 | SNP | T | C | T | T | T | T | C/T | ||||||||||||||||
| rs29094982 MPD | dbSNP | MGI SNP Detail | ChrX:103397126 | f | Pgk1 : Intron | 1 | SNP | C | C | C | C | C | C | T | C | C | T | C | C/T | |||||||||||
| SNP ID (dbSNP Build 128) | Map Position (NCBI Build 37) | | Gene : dbSNP Function Class | Assays (ss) | Variation Type | | | | | | | | | | | | | | | | | | | | | | | Allele Summary (all strains) |
| rs29094981 MPD | dbSNP | MGI SNP Detail | ChrX:103397175 | f | Pgk1 : Intron | 1 | SNP | T | T | T | T | G | T | T | T | T | T | T | G/T | |||||||||||
| rs29094980 MPD | dbSNP | MGI SNP Detail | ChrX:103397758 | f | Pgk1 : Intron | 1 | SNP | C | C | C | T | C | C | T | T | C/T | ||||||||||||||
| rs29094979 MPD | dbSNP | MGI SNP Detail | ChrX:103398412 | f | Pgk1 : Intron | 1 | SNP | T | T | T | A | T | T | T | T | T | A/T | |||||||||||||
| rs29094978 MPD | dbSNP | MGI SNP Detail | ChrX:103398531 | f | Pgk1 : Intron | 1 | SNP | C | C | C | C | C | C | C | T | C | C | C | C/T |
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc |
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last database update 05/08/2013 MGI 5.13 |
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