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Genome
Coordinate Discrepancy The genome coordinates for mouse SNPs are derived from a different NCBI build of the mouse genome than are the genome coordinates for MGI genes. (see details). |
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Symbol Name ID |
Iqsec2 IQ motif and Sec7 domain 2 MGI:3528396 |
| SNP ID (dbSNP Build 128) | Map Position (NCBI Build 37) |  | Gene : dbSNP Function Class | Assays (ss) | Variation Type |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | Allele Summary (all strains) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| rs29296925 MPD | dbSNP | MGI SNP Detail | ChrX:148611723 | f | Iqsec2 : Locus-Region | 1 | SNP | A | A | A | A | A | A | A | A | G | A | A | A | A | G | A | A/G | ||
| rs29296924 MPD | dbSNP | MGI SNP Detail | ChrX:148612195 | f | Iqsec2 : Locus-Region | 1 | SNP | C | C | C | C | C | C | C | C | T | C | C | C | C | T | C | C/T | ||
| rs29296553 MPD | dbSNP | MGI SNP Detail | ChrX:148612239 | f | Iqsec2 : Locus-Region | 1 | SNP | C | C | C | C | C | C | C | C | T | C | C | C | C | T | C | C/T | ||
| rs29296552 MPD | dbSNP | MGI SNP Detail | ChrX:148612735 | f | Iqsec2 : Locus-Region | 1 | SNP | T | T | T | T | T | T | T | T | C | T | T | T | T | C | T | C/T | ||
| rs29296551 MPD | dbSNP | MGI SNP Detail | ChrX:148612850 | f | Iqsec2 : Locus-Region | 1 | SNP | C | C | C | C | C | C | C | C | T | C | C | C | C | T | C | C/T | ||
| rs29296550 MPD | dbSNP | MGI SNP Detail | ChrX:148612876 | f | Iqsec2 : Locus-Region | 1 | SNP | G | G | G | G | G | A | G | G | G | G | G | G | G | G | G | A/G | ||
| rs29296549 MPD | dbSNP | MGI SNP Detail | ChrX:148613104 | f | Iqsec2 : Locus-Region | 1 | SNP | T | T | T | T | T | C | T | T | T | T | T | T | T | T | T | C/T | ||
| rs29296548 MPD | dbSNP | MGI SNP Detail | ChrX:148613447 | f | Iqsec2 : Locus-Region | 1 | SNP | A | A | A | A | A | C | A | A | A | A | A | A | A | A | A | A/C | ||
| rs29296547 MPD | dbSNP | MGI SNP Detail | ChrX:148613823 | f | Iqsec2 : Intron | 1 | SNP | T | T | C | T | T | C | T | T | C | T | T | T | T | C | C | C/T | ||
| rs29296546 MPD | dbSNP | MGI SNP Detail | ChrX:148614243 | f | Iqsec2 : Intron | 1 | SNP | T | T | T | T | T | C | T | T | T | T | T | T | T | T | T | C/T | ||
| rs29296545 MPD | dbSNP | MGI SNP Detail | ChrX:148614310 | f | Iqsec2 : Intron | 1 | SNP | G | G | G | G | G | G | G | G | G | G | G | G | G | A | G | A/G | ||
| rs29296544 MPD | dbSNP | MGI SNP Detail | ChrX:148614381 | f | Iqsec2 : Intron | 1 | SNP | C | C | C | C | C | T | C | C | C | C | C | C | C | C | C | C/T | ||
| rs29296203 MPD | dbSNP | MGI SNP Detail | ChrX:148614639 | f | Iqsec2 : Intron | 1 | SNP | C | C | C | C | C | T | C | C | C | C | C | C | C | C | C | C/T | ||
| rs29296202 MPD | dbSNP | MGI SNP Detail | ChrX:148614855 | f | Iqsec2 : Intron | 1 | SNP | C | C | C | C | C | G | C | C | G | C | C | C | C | G | C | C/G | ||
| rs29296201 MPD | dbSNP | MGI SNP Detail | ChrX:148614947 | f | Iqsec2 : Intron | 1 | SNP | T | T | T | T | T | C | T | T | C | T | T | T | T | C | T | C/T | ||
| rs29296200 MPD | dbSNP | MGI SNP Detail | ChrX:148616289 | f | Iqsec2 : Intron | 1 | SNP | C | C | C | C | C | T | C | C | C | C | C | C | C | C | C | C/T | ||
| rs29296199 MPD | dbSNP | MGI SNP Detail | ChrX:148616604 | f | Iqsec2 : Intron | 1 | SNP | G | G | G | G | G | A | G | G | A | G | G | G | G | A | G | A/G | ||
| rs29296198 MPD | dbSNP | MGI SNP Detail | ChrX:148616857 | f | Iqsec2 : Intron | 1 | SNP | G | G | G | G | G | A | G | G | G | G | G | A | G | A/G | ||||
| rs29296197 MPD | dbSNP | MGI SNP Detail | ChrX:148617416 | f | Iqsec2 : Intron | 1 | SNP | G | G | G | G | G | A | G | G | G | G | G | G | A | G | A/G | |||
| rs29296196 MPD | dbSNP | MGI SNP Detail | ChrX:148617420 | f | Iqsec2 : Intron | 1 | SNP | A | A | A | A | A | A | T | A | A | A | A | A/T | ||||||
| rs29296195 MPD | dbSNP | MGI SNP Detail | ChrX:148619655 | f | Iqsec2 : Intron | 1 | SNP | T | T | C | T | T | C | T | T | C | T | T | T | T | C | C | C/T | ||
| rs6369077 MPD | dbSNP | MGI SNP Detail | ChrX:148620527 | f | Iqsec2 : Intron | 1 | SNP | A | T | A/T | |||||||||||||||
| rs6369109 MPD | dbSNP | MGI SNP Detail | ChrX:148620542 | f | Iqsec2 : Intron | 1 | SNP | G | A | A/G | |||||||||||||||
| rs6369128 MPD | dbSNP | MGI SNP Detail | ChrX:148620552 | f | Iqsec2 : Intron | 1 | SNP | T | G | G/T | |||||||||||||||
| rs29296194 MPD | dbSNP | MGI SNP Detail | ChrX:148620810 | f | Iqsec2 : Intron | 1 | SNP | T | T | T | T | T | C | T | T | T | T | T | T | T | T | T | C/T | ||
| SNP ID (dbSNP Build 128) | Map Position (NCBI Build 37) | | Gene : dbSNP Function Class | Assays (ss) | Variation Type | | | | | | | | | | | | | | | | | | Allele Summary (all strains) |
| rs29295733 MPD | dbSNP | MGI SNP Detail | ChrX:148620878 | f | Iqsec2 : Intron | 1 | SNP | G | G | G | G | G | T | G | G | T | G | G | G | G | T | G | G/T | ||
| rs29295732 MPD | dbSNP | MGI SNP Detail | ChrX:148621000 | f | Iqsec2 : Intron | 1 | SNP | T | T | T | T | T | C | T | T | T | T | T | T | T | T | T | C/T | ||
| rs29295731 MPD | dbSNP | MGI SNP Detail | ChrX:148621745 | f | Iqsec2 : Intron | 1 | SNP | C | C | C | C | C | C | C | C | C | C | C | T | C | C/T | ||||
| rs29295730 MPD | dbSNP | MGI SNP Detail | ChrX:148621811 | f | Iqsec2 : Intron | 1 | SNP | T | T | T | T | T | C | T | T | C | T | T | T | T | C | T | C/T | ||
| rs29295729 MPD | dbSNP | MGI SNP Detail | ChrX:148622088 | f | Iqsec2 : Intron | 1 | SNP | A | A | G | A | A | G | A | A | A | A | A | A | G | G | A/G | |||
| rs29295728 MPD | dbSNP | MGI SNP Detail | ChrX:148622265 | f | Iqsec2 : Intron | 1 | SNP | G | G | A | G | G | G | G | G | G | G | G | G | G | G | G | A/G | ||
| rs29295727 MPD | dbSNP | MGI SNP Detail | ChrX:148622421 | f | Iqsec2 : Intron | 1 | SNP | C | C | C | C | C | T | C | C | C | C | C | C | C | C | C | C/T | ||
| rs29295726 MPD | dbSNP | MGI SNP Detail | ChrX:148622430 | f | Iqsec2 : Intron | 1 | SNP | C | C | C | C | C | C | C | C | C | C | C | C | C | T | C | C/T | ||
| rs29295725 MPD | dbSNP | MGI SNP Detail | ChrX:148622485 | f | Iqsec2 : Intron | 1 | SNP | G | G | G | G | G | C | G | G | C | G | G | G | G | C | G | C/G | ||
| rs29295724 MPD | dbSNP | MGI SNP Detail | ChrX:148622541 | f | Iqsec2 : Intron | 1 | SNP | C | C | C | C | C | T | C | C | C | C | C | C | C | C | C | C/T | ||
| rs29295473 MPD | dbSNP | MGI SNP Detail | ChrX:148622601 | f | Iqsec2 : Intron | 1 | SNP | G | G | G | G | G | A | G | G | G | G | G | G | G | G | G | A/G | ||
| rs29295472 MPD | dbSNP | MGI SNP Detail | ChrX:148622777 | f | Iqsec2 : Intron | 1 | SNP | A | A | G | A | A | A | A | A | A | A | A | A | A | A | G | A/G | ||
| rs29295471 MPD | dbSNP | MGI SNP Detail | ChrX:148622837 | f | Iqsec2 : Intron | 1 | SNP | G | G | G | G | G | A | G | G | A | G | G | G | G | A | G | A/G | ||
| rs29295470 MPD | dbSNP | MGI SNP Detail | ChrX:148623199 | f | Iqsec2 : Intron | 1 | SNP | C | C | C | C | C | C | C | C | T | C | C | C | C | T | C | C/T | ||
| rs29295469 MPD | dbSNP | MGI SNP Detail | ChrX:148623708 | f | Iqsec2 : Intron | 1 | SNP | C | C | C | C | C | T | C | C | C | C | C | C | C | C | C | C/T | ||
| rs29295468 MPD | dbSNP | MGI SNP Detail | ChrX:148624073 | f | Iqsec2 : Intron | 1 | SNP | A | A | A | A | A | A | A | A | C | A | A | A | A | C | A | A/C | ||
| rs29295467 MPD | dbSNP | MGI SNP Detail | ChrX:148624620 | f | Iqsec2 : Intron | 1 | SNP | T | T | T | T | C | T | T | T | T | T | T | C | T | C/T | ||||
| rs29295466 MPD | dbSNP | MGI SNP Detail | ChrX:148624808 | f | Iqsec2 : Intron | 1 | SNP | T | T | T | T | T | C | T | T | C | T | T | T | T | C | T | C/T | ||
| rs29295465 MPD | dbSNP | MGI SNP Detail | ChrX:148624920 | f | Iqsec2 : Intron | 1 | SNP | T | T | T | T | T | C | T | T | C | T | T | T | T | C | T | C/T | ||
| rs29295464 MPD | dbSNP | MGI SNP Detail | ChrX:148625019 | f | Iqsec2 : Intron | 1 | SNP | C | C | C | C | C | A | C | C | A | C | C | C | C | A | C | A/C | ||
| rs29294983 MPD | dbSNP | MGI SNP Detail | ChrX:148625099 | f | Iqsec2 : Intron | 1 | SNP | C | C | C | C | C | A | C | C | A | C | C | C | C | A | C | A/C | ||
| rs29294982 MPD | dbSNP | MGI SNP Detail | ChrX:148625152 | f | Iqsec2 : Intron | 1 | SNP | G | G | G | G | G | G | G | G | A | G | G | G | G | G | G | A/G | ||
| rs29294981 MPD | dbSNP | MGI SNP Detail | ChrX:148625217 | f | Iqsec2 : Intron | 1 | SNP | T | T | T | T | T | A | T | T | A | T | T | T | T | A | T | A/T | ||
| rs29294980 MPD | dbSNP | MGI SNP Detail | ChrX:148626385 | f | Iqsec2 : Intron | 1 | SNP | A | A | A | A | A | G | A | A | A | A | A | A | A | A | A | A/G | ||
| rs29294979 MPD | dbSNP | MGI SNP Detail | ChrX:148626781 | f | Iqsec2 : Intron | 1 | SNP | T | T | T | T | T | A | T | T | A | T | T | T | T | A | T | A/T | ||
| SNP ID (dbSNP Build 128) | Map Position (NCBI Build 37) | | Gene : dbSNP Function Class | Assays (ss) | Variation Type | | | | | | | | | | | | | | | | | | Allele Summary (all strains) |
| rs29294978 MPD | dbSNP | MGI SNP Detail | ChrX:148626819 | f | Iqsec2 : Intron | 1 | SNP | G | G | G | G | G | A | G | G | A | G | G | G | G | A | G | A/G | ||
| rs29294977 MPD | dbSNP | MGI SNP Detail | ChrX:148626949 | f | Iqsec2 : Intron | 1 | SNP | T | T | T | T | T | C | T | T | T | T | T | T | T | T | T | C/T | ||
| rs29294976 MPD | dbSNP | MGI SNP Detail | ChrX:148627209 | f | Iqsec2 : Intron | 1 | SNP | C | C | C | C | C | T | C | C | T | C | C | C | C | T | C | C/T | ||
| rs29294975 MPD | dbSNP | MGI SNP Detail | ChrX:148627897 | f | Iqsec2 : Intron | 1 | SNP | C | C | C | C | C | C | C | C | C | C | C | C | C | T | C | C/T | ||
| rs29294974 MPD | dbSNP | MGI SNP Detail | ChrX:148629584 | f | Iqsec2 : Intron | 1 | SNP | G | G | G | G | G | C | G | G | C | G | G | G | G | C | G | C/G | ||
| rs29294483 MPD | dbSNP | MGI SNP Detail | ChrX:148629622 | f | Iqsec2 : Intron | 1 | SNP | T | T | T | T | T | C | T | T | T | T | T | T | T | T | C/T | |||
| rs29294482 MPD | dbSNP | MGI SNP Detail | ChrX:148629748 | f | Iqsec2 : Intron | 1 | SNP | A | A | A | A | A | G | A | A | G | A | A | A | A | G | A | A/G | ||
| rs29294481 MPD | dbSNP | MGI SNP Detail | ChrX:148629787 | f | Iqsec2 : Intron | 1 | SNP | C | C | C | C | C | G | C | G | C | C | C | C | G | C | C/G | |||
| rs29294480 MPD | dbSNP | MGI SNP Detail | ChrX:148630376 | f | Iqsec2 : Intron | 1 | SNP | G | G | G | G | G | A | G | G | G | G | G | G | G | G | G | A/G | ||
| rs29294479 MPD | dbSNP | MGI SNP Detail | ChrX:148630393 | f | Iqsec2 : Intron | 1 | SNP | A | A | A | A | A | A | A | A | G | A | A | A | A | A | A | A/G | ||
| rs29294478 MPD | dbSNP | MGI SNP Detail | ChrX:148630667 | f | Iqsec2 : Intron | 1 | SNP | C | C | C | C | C | C | C | C | C | C | C | C | T | C | C/T | |||
| rs29294477 MPD | dbSNP | MGI SNP Detail | ChrX:148630688 | f | Iqsec2 : Intron | 1 | SNP | A | A | A | A | G | A | A | G | A | A | A | A | G | A | A/G | |||
| rs29294476 MPD | dbSNP | MGI SNP Detail | ChrX:148630791 | f | Iqsec2 : Intron | 1 | SNP | T | T | T | T | T | T | T | T | G | T | T | T | T | G | T | G/T | ||
| rs29294475 MPD | dbSNP | MGI SNP Detail | ChrX:148631130 | f | Iqsec2 : Intron | 1 | SNP | A | A | A | A | A | A | A | A | G | A | A | A | A | G | A | A/G | ||
| rs29294474 MPD | dbSNP | MGI SNP Detail | ChrX:148631161 | f | Iqsec2 : Intron | 1 | SNP | C | C | C | C | C | C | C | C | T | C | C | C | C | T | C | C/T | ||
| rs29293983 MPD | dbSNP | MGI SNP Detail | ChrX:148631217 | f | Iqsec2 : Intron | 1 | SNP | C | C | C | C | C | C | C | C | G | C | C | C | C | G | C | C/G | ||
| rs29293982 MPD | dbSNP | MGI SNP Detail | ChrX:148631367 | f | Iqsec2 : Intron | 1 | SNP | A | A | A | A | A | G | A | A | G | A | A | A | A | G | A | A/G | ||
| rs29293981 MPD | dbSNP | MGI SNP Detail | ChrX:148631453 | f | Iqsec2 : Intron | 1 | SNP | A | A | A | A | A | G | A | A | G | A | A | A | A | G | A | A/G | ||
| rs29293980 MPD | dbSNP | MGI SNP Detail | ChrX:148631549 | f | Iqsec2 : Intron | 1 | SNP | A | A | A | A | A | C | A | A | C | A | A | A | A | C | A | A/C | ||
| rs29293979 MPD | dbSNP | MGI SNP Detail | ChrX:148631620 | f | Iqsec2 : Intron | 1 | SNP | C | C | C | C | C | C | C | C | T | C | C | C | C | T | C | C/T | ||
| rs29293978 MPD | dbSNP | MGI SNP Detail | ChrX:148631632 | f | Iqsec2 : Intron | 1 | SNP | C | C | C | C | C | A | C | C | C | C | C | C | C | C | C | A/C | ||
| rs29293977 MPD | dbSNP | MGI SNP Detail | ChrX:148631995 | f | Iqsec2 : Intron | 1 | SNP | T | T | T | T | T | T | T | T | C | T | T | T | T | C | T | C/T | ||
| rs29293976 MPD | dbSNP | MGI SNP Detail | ChrX:148632504 | f | Iqsec2 : Intron | 1 | SNP | C | C | A | C | C | C | C | C | C | C | C | C | C | C | A | A/C | ||
| rs29293975 MPD | dbSNP | MGI SNP Detail | ChrX:148632579 | f | Iqsec2 : Intron | 1 | SNP | T | T | C | T | T | C | T | T | T | T | T | C | C | C/T | ||||
| rs29293974 MPD | dbSNP | MGI SNP Detail | ChrX:148635143 | f | Iqsec2 : Intron | 1 | SNP | C | C | C | C | C | T | C | C | C | C | C | C | C | C | C | C/T | ||
| SNP ID (dbSNP Build 128) | Map Position (NCBI Build 37) | | Gene : dbSNP Function Class | Assays (ss) | Variation Type | | | | | | | | | | | | | | | | | | Allele Summary (all strains) |
| rs29293593 MPD | dbSNP | MGI SNP Detail | ChrX:148635186 | f | Iqsec2 : Intron | 1 | SNP | T | T | T | T | T | C | T | T | C | T | T | T | T | C | T | C/T | ||
| rs29293592 MPD | dbSNP | MGI SNP Detail | ChrX:148635302 | f | Iqsec2 : Intron | 1 | SNP | T | T | T | T | T | G | T | T | T | T | T | G | T | G/T | ||||
| rs29293591 MPD | dbSNP | MGI SNP Detail | ChrX:148635641 | f | Iqsec2 : Intron | 1 | SNP | G | G | G | G | G | G | G | T | G | G | G | G | G | G/T | ||||
| rs29293590 MPD | dbSNP | MGI SNP Detail | ChrX:148636062 | f | Iqsec2 : Intron | 1 | SNP | T | T | T | T | T | T | C | T | T | T | T | C | T | C/T | ||||
| rs29293589 MPD | dbSNP | MGI SNP Detail | ChrX:148636164 | f | Iqsec2 : Intron | 1 | SNP | A | A | A | A | A | A | A | A | A | A | G | A | A/G | |||||
| rs29293588 MPD | dbSNP | MGI SNP Detail | ChrX:148636338 | f | Iqsec2 : Intron | 1 | SNP | T | T | T | T | T | T | A | T | T | T | T | A/T | ||||||
| rs29293587 MPD | dbSNP | MGI SNP Detail | ChrX:148637277 | f | Iqsec2 : Intron | 1 | SNP | C | C | C | C | C | C | C | T | C | C | C | C | T | C | C/T | |||
| rs29293586 MPD | dbSNP | MGI SNP Detail | ChrX:148637613 | f | Iqsec2 : Coding-Synonymous | 1 | SNP | A | A | A | A | A | A | G | A | A | A | A | G | A | A/G | ||||
| rs29293585 MPD | dbSNP | MGI SNP Detail | ChrX:148638407 | f | Iqsec2 : Intron | 1 | SNP | A | A | A | A | A | A | A | G | A | A | A | A | G | A | A/G | |||
| rs29293584 MPD | dbSNP | MGI SNP Detail | ChrX:148638925 | f | Iqsec2 : Intron | 1 | SNP | T | T | T | T | T | T | T | T | T | T | T | T | A | T | A/T | |||
| rs33850228 MPD | dbSNP | MGI SNP Detail | ChrX:148641460 | f | Iqsec2 : Intron | 1 | SNP | C | C | C | C | C | C | T | C | C | T | C | C/T | ||||||
| rs33850227 MPD | dbSNP | MGI SNP Detail | ChrX:148642418 | f | Iqsec2 : Intron | 1 | SNP | G | G | G | G | G | G | A | G | G | G | G | A | G | A/G | ||||
| rs33850226 MPD | dbSNP | MGI SNP Detail | ChrX:148643441 | f | Iqsec2 : Coding-Synonymous | 1 | SNP | C | C | C | C | C | C | C | C | C | C | C | C | T | C | C/T | |||
| rs33850225 MPD | dbSNP | MGI SNP Detail | ChrX:148646183 | f | Iqsec2 : Intron | 1 | SNP | T | T | T | T | T | T | T | C | T | T | T | T | C | T | C/T | |||
| rs33850224 MPD | dbSNP | MGI SNP Detail | ChrX:148646482 | f | Iqsec2 : Intron | 1 | SNP | T | T | T | T | T | T | T | T | T | T | T | T | G | T | G/T | |||
| rs33850013 MPD | dbSNP | MGI SNP Detail | ChrX:148646497 | f | Iqsec2 : Intron | 1 | SNP | A | A | A | A | A | A | A | A | A | A | G | A | A/G | |||||
| rs33850012 MPD | dbSNP | MGI SNP Detail | ChrX:148658694 | f | Iqsec2 : mRNA-UTR | 1 | SNP | T | T | C | T | T | C | T | T | T | T | C | T | C/T | |||||
| rs33850011 MPD | dbSNP | MGI SNP Detail | ChrX:148658914 | f | Iqsec2 : mRNA-UTR | 1 | SNP | G | G | G | G | G | G | A | G | G | A | G | A/G | ||||||
| rs33850010 MPD | dbSNP | MGI SNP Detail | ChrX:148660034 | f | Iqsec2 : Locus-Region | 1 | SNP | G | G | G | G | G | A | G | G | A | G | G | G | G | A | G | A/G | ||
| rs33850009 MPD | dbSNP | MGI SNP Detail | ChrX:148660106 | f | Iqsec2 : Locus-Region | 1 | SNP | T | T | T | T | T | G | T | T | G | T | T | T | T | G | T | G/T | ||
| rs33850008 MPD | dbSNP | MGI SNP Detail | ChrX:148660278 | f | Iqsec2 : Locus-Region | 1 | SNP | T | T | G | T | T | T | T | T | T | T | T | T | T | T | T | G/T |
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc |
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last database update 05/08/2013 MGI 5.13 |
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