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Genome
Coordinate Discrepancy The genome coordinates for mouse SNPs are derived from a different NCBI build of the mouse genome than are the genome coordinates for MGI genes. (see details). |
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Symbol Name ID |
Nkx3-1 NK-3 transcription factor, locus 1 (Drosophila) MGI:97352 |
| SNP ID (dbSNP Build 128) | Map Position (NCBI Build 37) |  | Gene : dbSNP Function Class | Assays (ss) | Variation Type |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | Allele Summary (all strains) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| rs46860167 MPD | dbSNP | MGI SNP Detail | Chr14:69806964 | f | Nkx3-1 : Locus-Region | 1 | SNP | G | G | G | G | G | A | G | G | G | G | G | G | G | A/G | ||||
| rs46163483 MPD | dbSNP | MGI SNP Detail | Chr14:69807027 | f | Nkx3-1 : Locus-Region | 1 | SNP | A | A | A | A | A | A | C | A | A | C | A | A | A/C | |||||
| rs50966473 MPD | dbSNP | MGI SNP Detail | Chr14:69807233 | f | Nkx3-1 : Locus-Region | 1 | SNP | A | A | A | A | A | G | A | A | A | A | A | A | A | A | A/G | |||
| rs46129103 MPD | dbSNP | MGI SNP Detail | Chr14:69807567 | f | Nkx3-1 : Locus-Region | 1 | SNP | T | T | T | T | T | T | G | T | T | G | T | T | G/T | |||||
| rs50763450 MPD | dbSNP | MGI SNP Detail | Chr14:69807658 | f | Nkx3-1 : Locus-Region | 1 | SNP | G | A | A | A | A | G | A | A | G | A | G | G | A | G | A/G | |||
| rs30114774 MPD | dbSNP | MGI SNP Detail | Chr14:69808337 | f | Nkx3-1 : Locus-Region | 1 | SNP | A | G | G | G | A/G | |||||||||||||
| rs30360467 MPD | dbSNP | MGI SNP Detail | Chr14:69808405 | f | Nkx3-1 : Locus-Region | 2 | SNP | C | C | T | T | T | T | T | C | T | T | C | T | C | C | T | C/T | ||
| rs30842988 MPD | dbSNP | MGI SNP Detail | Chr14:69808520 | f | Nkx3-1 : Locus-Region | 2 | SNP | G | A | G | G | G | G | G | G | G | G | A | G | G | A | G | G | A/G | |
| rs51851465 MPD | dbSNP | MGI SNP Detail | Chr14:69808920 | f | Nkx3-1 : Coding-Synonymous | 1 | SNP | G | G | G | G | G | G | G | G | G | T | G | G | G/T | |||||
| rs51407584 MPD | dbSNP | MGI SNP Detail | Chr14:69809572 | f | Nkx3-1 : Intron | 1 | SNP | T | T | T | T | T | T | T | T | T | T | T | T | A | T | A/T | |||
| rs30125386 MPD | dbSNP | MGI SNP Detail | Chr14:69809729 | f | Nkx3-1 : Intron | 1 | SNP | A | A | G | G | G | A/G | ||||||||||||
| rs46183446 MPD | dbSNP | MGI SNP Detail | Chr14:69809775 | f | Nkx3-1 : Intron | 1 | SNP | G | G | G | G | G | G | G | G | C | G | G | C | C | C/G | ||||
| rs31384702 MPD | dbSNP | MGI SNP Detail | Chr14:69810063 | f | Nkx3-1 : Coding-Synonymous | 2 | SNP | T | T | C | C | C | C | C | C | C | C | C | T | C | C | C | C/T | ||
| rs49119358 MPD | dbSNP | MGI SNP Detail | Chr14:69810565 | f | Nkx3-1 : mRNA-UTR | 1 | SNP | A | G | G | G | G | G | G | G | A | A | G | A | A | A/G | ||||
| rs48636693 MPD | dbSNP | MGI SNP Detail | Chr14:69811068 | f | Nkx3-1 : mRNA-UTR | 1 | SNP | C | C | C | C | C | C | C | C | C | C | G | C | C | C | G | C/G | ||
| rs31300209 MPD | dbSNP | MGI SNP Detail | Chr14:69811229 | f | Nkx3-1 : mRNA-UTR | 1 | SNP | G | A | A | A | A/G | |||||||||||||
| rs31367877 MPD | dbSNP | MGI SNP Detail | Chr14:69811230 | f | Nkx3-1 : mRNA-UTR | 1 | SNP | T | A | A | A | A/T | |||||||||||||
| rs31296628 MPD | dbSNP | MGI SNP Detail | Chr14:69811242 | f | Nkx3-1 : mRNA-UTR | 1 | SNP | G | A | A | A | A/G | |||||||||||||
| rs47837631 MPD | dbSNP | MGI SNP Detail | Chr14:69811952 | f | Nkx3-1 : mRNA-UTR | 1 | SNP | T | C | C | C | C | C | C | C | C | T | C | C | C | C/T | ||||
| rs46898404 MPD | dbSNP | MGI SNP Detail | Chr14:69812223 | f | Nkx3-1 : mRNA-UTR | 1 | SNP | G | A | A | A | A | A | A | A | A | A | G | A | A | A | A/G | |||
| rs47763479 MPD | dbSNP | MGI SNP Detail | Chr14:69812330 | f | Nkx3-1 : mRNA-UTR | 1 | SNP | A | G | G | G | G | G | G | G | G | A | G | G | A/G | |||||
| rs46968396 MPD | dbSNP | MGI SNP Detail | Chr14:69812430 | f | Nkx3-1 : mRNA-UTR | 1 | SNP | C | A | A | A | C | A | A | A | C | C | A | C | C | A/C | ||||
| rs47272270 MPD | dbSNP | MGI SNP Detail | Chr14:69812537 | f | Nkx3-1 : mRNA-UTR | 1 | SNP | C | T | T | T | T | T | T | T | C | T | C | T | C/T | |||||
| rs45821581 MPD | dbSNP | MGI SNP Detail | Chr14:69812568 | f | Nkx3-1 : mRNA-UTR | 1 | SNP | A | G | G | G | G | G | G | G | G | G | A | G | A | G | A/G | |||
| rs50835388 MPD | dbSNP | MGI SNP Detail | Chr14:69812608 | f | Nkx3-1 : mRNA-UTR | 1 | SNP | G | G | G | G | G | G | G | G | G | T | G | G | G | T | G/T | |||
| SNP ID (dbSNP Build 128) | Map Position (NCBI Build 37) | | Gene : dbSNP Function Class | Assays (ss) | Variation Type | | | | | | | | | | | | | | | | | | Allele Summary (all strains) |
| rs46591712 MPD | dbSNP | MGI SNP Detail | Chr14:69812866 | f | Nkx3-1 : Locus-Region | 1 | SNP | C | A | A | A | A | C | A | A | A | C | C | A | C | C | A/C | |||
| rs46056267 MPD | dbSNP | MGI SNP Detail | Chr14:69812901 | f | Nkx3-1 : Locus-Region | 1 | SNP | C | T | T | T | T | T | T | T | C | T | C/T | |||||||
| rs50367781 MPD | dbSNP | MGI SNP Detail | Chr14:69813172 | f | Nkx3-1 : Locus-Region | 1 | SNP | G | G | G | G | G | G | G | G | G | G | G | A | G | A/G |
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc |
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last database update 05/08/2013 MGI 5.13 |
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