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Mouse SNPs
Query Results -- Summary
 Symbol
Name
ID
Col1a2
collagen, type I, alpha 2
MGI:88468

89 matching SNPs displayed
Full result set is also available in a tab-delimited format.
Include SNPs that map to multiple locations

Legend
 Results are sorted by chromosome/coordinate value. Chromosome transitions are marked by blank rows.
SNP ID
(dbSNP Build 142)
Map Position
(GRCm38)
Gene : dbSNP Function ClassAssays
(ss)
Variation
Type
Allele
Summary
(all strains)
rs243762058
MPD | dbSNP | MGI SNP Detail
Chr6:4503962f 1SNP     TA  A/T
rs261862333
MPD | dbSNP | MGI SNP Detail
Chr6:4504414f 1SNP     CT  C/T
rs32456814
MPD | dbSNP | MGI SNP Detail
Chr6:4504465f 1SNP     GT  G/T
rs245646429
MPD | dbSNP | MGI SNP Detail
Chr6:4504471f 1SNP     AG  A/G
rs259066605
MPD | dbSNP | MGI SNP Detail
Chr6:4504510f 1SNP     AG  A/G
rs51077798
MPD | dbSNP | MGI SNP Detail
Chr6:4504537f 2SNPT   TGT  G/T
rs30517328
MPD | dbSNP | MGI SNP Detail
Chr6:4504540f 3SNPGT GGGG  G/T
rs32456815
MPD | dbSNP | MGI SNP Detail
Chr6:4504721f 1SNP     GC  C/G
rs234815360
MPD | dbSNP | MGI SNP Detail
Chr6:4504744f 1SNP     GA  A/G
rs254411272
MPD | dbSNP | MGI SNP Detail
Chr6:4504768f 1SNP     AG  A/G
rs214072098
MPD | dbSNP | MGI SNP Detail
Chr6:4505123f 1SNP     AG  A/G
rs232370283
MPD | dbSNP | MGI SNP Detail
Chr6:4505246f 1SNP     TC  C/T
rs32456818
MPD | dbSNP | MGI SNP Detail
Chr6:4505363f 1SNP     TA  A/T
rs32456822
MPD | dbSNP | MGI SNP Detail
Chr6:4506033f 1SNP     CA  A/C
rs234759618
MPD | dbSNP | MGI SNP Detail
Chr6:4506159f 1SNP     TC  C/T
rs32457594
MPD | dbSNP | MGI SNP Detail
Chr6:4506233f 1SNP     CG  C/G
rs32457595
MPD | dbSNP | MGI SNP Detail
Chr6:4506254f 1SNP     CT  C/T
rs240834971
MPD | dbSNP | MGI SNP Detail
Chr6:4506374f 1SNP     GA  A/G
rs30515437
MPD | dbSNP | MGI SNP Detail
Chr6:4506528f 3SNPCTC CCC CC/T
rs219404592
MPD | dbSNP | MGI SNP Detail
Chr6:4506546f 1SNP     CG  C/G
rs32454399
MPD | dbSNP | MGI SNP Detail
Chr6:4508317f 2SNPT T TCT  C/T
rs30064148
MPD | dbSNP | MGI SNP Detail
Chr6:4508700f 2SNP GA AGA  A/G
rs228054965
MPD | dbSNP | MGI SNP Detail
Chr6:4509666f 1SNP     AG  A/G
rs6186117
MPD | dbSNP | MGI SNP Detail
Chr6:4509941f 1SNP C     T C/T
rs6186547
MPD | dbSNP | MGI SNP Detail
Chr6:4509963f 4SNPCTC CCCC C/T
SNP ID
(dbSNP Build 142)
Map Position
(GRCm38)
Gene : dbSNP Function ClassAssays
(ss)
Variation
Type
Allele
Summary
(all strains)
rs6199303
MPD | dbSNP | MGI SNP Detail
Chr6:4510065f 1SNP A     G A/G
rs264450852
MPD | dbSNP | MGI SNP Detail
Chr6:4510067f 1SNP     TC  C/T
rs6199900
MPD | dbSNP | MGI SNP Detail
Chr6:4510209f 1SNP C     T C/T
rs32455316
MPD | dbSNP | MGI SNP Detail
Chr6:4510279f 1SNP     TC  C/T
rs6200457
MPD | dbSNP | MGI SNP Detail
Chr6:4510313f 1SNP C     T C/T
rs32455317
MPD | dbSNP | MGI SNP Detail
Chr6:4510432f 1SNP     AG  A/G
rs213813896
MPD | dbSNP | MGI SNP Detail
Chr6:4510749f 1SNP     TC  C/T
rs226263768
MPD | dbSNP | MGI SNP Detail
Chr6:4511691f 1SNP     TG  G/T
rs30666252
MPD | dbSNP | MGI SNP Detail
Chr6:4511895f 2SNP GTTT   GG/T
rs245481754
MPD | dbSNP | MGI SNP Detail
Chr6:4512743f 1SNP     AG  A/G
rs216199048
MPD | dbSNP | MGI SNP Detail
Chr6:4512775f 1SNP     TC  C/T
rs234718591
MPD | dbSNP | MGI SNP Detail
Chr6:4513339f 1SNP     AC  A/C
rs264415818
MPD | dbSNP | MGI SNP Detail
Chr6:4513942f 1SNP     TC  C/T
rs212429680
MPD | dbSNP | MGI SNP Detail
Chr6:4513944f 1SNP     CA  A/C
rs235850941
MPD | dbSNP | MGI SNP Detail
Chr6:4513993f 1SNP     GA  A/G
rs30119906
MPD | dbSNP | MGI SNP Detail
Chr6:4514195f 3SNPATA AAA  A/T
rs6275208
MPD | dbSNP | MGI SNP Detail
Chr6:4514790f 1SNP G     A A/G
rs30907113
MPD | dbSNP | MGI SNP Detail
Chr6:4515294f 3SNPCAC CAC  A/C
rs239491447
MPD | dbSNP | MGI SNP Detail
Chr6:4515443f 1SNP     GA  A/G
rs252648656
MPD | dbSNP | MGI SNP Detail
Chr6:4515446f 1SNP     AG  A/G
rs221713422
MPD | dbSNP | MGI SNP Detail
Chr6:4515513f 1SNP     GA  A/G
rs30519867
MPD | dbSNP | MGI SNP Detail
Chr6:4515717f 3SNP TG GTG  G/T
rs30119445
MPD | dbSNP | MGI SNP Detail
Chr6:4516038f 3SNP TGGGTG  G/T
rs30949223
MPD | dbSNP | MGI SNP Detail
Chr6:4516068f 3SNP GCCCGC  C/G
rs245070299
MPD | dbSNP | MGI SNP Detail
Chr6:4516591f 1SNP     AG  A/G
SNP ID
(dbSNP Build 142)
Map Position
(GRCm38)
Gene : dbSNP Function ClassAssays
(ss)
Variation
Type
Allele
Summary
(all strains)
rs30564406
MPD | dbSNP | MGI SNP Detail
Chr6:4517941f 3SNPGAG GGG  A/G
rs32456290
MPD | dbSNP | MGI SNP Detail
Chr6:4519356f 2SNPA   AAA  A
rs30809337
MPD | dbSNP | MGI SNP Detail
Chr6:4519375f 3SNPTG TTTT  G/T
rs30562067
MPD | dbSNP | MGI SNP Detail
Chr6:4519715f 3SNPCA  CCC  A/C
rs30467654
MPD | dbSNP | MGI SNP Detail
Chr6:4519939f 3SNPAG  AAA  A/G
rs30611181
MPD | dbSNP | MGI SNP Detail
Chr6:4520165f 3SNPTCT TTT  C/T
rs30573489
MPD | dbSNP | MGI SNP Detail
Chr6:4520294f 2SNP TG GGG  G/T
rs29886656
MPD | dbSNP | MGI SNP Detail
Chr6:4520346f 3SNP AG  GG  A/G
rs46980807
MPD | dbSNP | MGI SNP Detail
Chr6:4520403f 1SNP     TC  C/T
rs29880110
MPD | dbSNP | MGI SNP Detail
Chr6:4520412f 2SNP AG  GA  A/G
rs32456291
MPD | dbSNP | MGI SNP Detail
Chr6:4520575f 2SNP  C  CC  C
rs29921052
MPD | dbSNP | MGI SNP Detail
Chr6:4520671f 3SNP GA AAA  A/G
rs30804543
MPD | dbSNP | MGI SNP Detail
Chr6:4520699f 3SNP CT TTT  C/T
rs30119862
MPD | dbSNP | MGI SNP Detail
Chr6:4521557f 3SNPCTC CCC  C/T
rs30906868
MPD | dbSNP | MGI SNP Detail
Chr6:4521839f 3SNPTAT TTT  A/T
rs30214896
MPD | dbSNP | MGI SNP Detail
Chr6:4521948f 3SNPTCT TTT  C/T
rs32458004
MPD | dbSNP | MGI SNP Detail
Chr6:4522156f 2SNPA A  AA  A
rs30035607
MPD | dbSNP | MGI SNP Detail
Chr6:4523027f 3SNPTCT TTT  C/T
rs32458005
MPD | dbSNP | MGI SNP Detail
Chr6:4523249f 1SNP     AG  A/G
rs32458006
MPD | dbSNP | MGI SNP Detail
Chr6:4523599f 1SNP     CT  C/T
rs30070257
MPD | dbSNP | MGI SNP Detail
Chr6:4523660f 3SNPTGTTTTT  G/T
rs49546097
MPD | dbSNP | MGI SNP Detail
Chr6:4526346f 1SNP  T T   GG/T
rs30170734
MPD | dbSNP | MGI SNP Detail
Chr6:4527999f 2SNPTT  A    A/T
rs32459902
MPD | dbSNP | MGI SNP Detail
Chr6:4529293f 1SNPA   A   GA/G
rs47253841
MPD | dbSNP | MGI SNP Detail
Chr6:4529537f 1SNPG   G   AA/G
SNP ID
(dbSNP Build 142)
Map Position
(GRCm38)
Gene : dbSNP Function ClassAssays
(ss)
Variation
Type
Allele
Summary
(all strains)
rs46682617
MPD | dbSNP | MGI SNP Detail
Chr6:4529558f 1SNP    T   CC/T
rs49848702
MPD | dbSNP | MGI SNP Detail
Chr6:4529612f 1SNPA A A   GA/G
rs50720367
MPD | dbSNP | MGI SNP Detail
Chr6:4529613f 1SNPC C C   TC/T
rs49789136
MPD | dbSNP | MGI SNP Detail
Chr6:4530235f 1SNPC C C   AA/C
rs32460779
MPD | dbSNP | MGI SNP Detail
Chr6:4530255f 1SNPG G G   CC/G
rs32460780
MPD | dbSNP | MGI SNP Detail
Chr6:4530283f 1SNP        CC
rs49885471
MPD | dbSNP | MGI SNP Detail
Chr6:4530402f 1SNPT T T   GG/T
rs30845823
MPD | dbSNP | MGI SNP Detail
Chr6:4535033f 3SNPAGAAAAA  A/G
rs6353520
MPD | dbSNP | MGI SNP Detail
Chr6:4537576f 1SNP A     G A/G
rs6354093
MPD | dbSNP | MGI SNP Detail
Chr6:4537685f 1SNP A     T A/T
rs6354459
MPD | dbSNP | MGI SNP Detail
Chr6:4537692f 1SNP C     T C/T
rs50064243
MPD | dbSNP | MGI SNP Detail
Chr6:4538268f 1SNP  A     GA/G
rs32458465
MPD | dbSNP | MGI SNP Detail
Chr6:4538325f 1SNP  A     GA/G
rs13459049
MPD | dbSNP | MGI SNP Detail
Chr6:4540674f 3SNPACA AAA  A/C

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last database update
06/15/2016
MGI 6.04
The Jackson Laboratory