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Genome
Coordinate Discrepancy The genome coordinates for mouse SNPs are derived from a different NCBI build of the mouse genome than are the genome coordinates for MGI genes. (see details). |
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Symbol Name ID |
Htr5b 5-hydroxytryptamine (serotonin) receptor 5B MGI:96284 |
| SNP ID (dbSNP Build 128) | Map Position (NCBI Build 37) |  | Gene : dbSNP Function Class | Assays (ss) | Variation Type |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | Allele Summary (all strains) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| rs30780623 MPD | dbSNP | MGI SNP Detail | Chr1:123404351 | f | Gm15393 : Coding-Synonymous Htr5b : Locus-Region | 1 | SNP | T | T | T | T | T | T | T | T | T | C | T | C/T | ||||||||
| rs30665894 MPD | dbSNP | MGI SNP Detail | Chr1:123404838 | f | Gm15393 : Intron Htr5b : Locus-Region | 1 | SNP | T | T | C | T | C/T | |||||||||||||||
| rs30780622 MPD | dbSNP | MGI SNP Detail | Chr1:123405119 | f | Gm15393 : Intron Htr5b : Locus-Region | 1 | SNP | C | C | C | C | C | C | C | C | C | C | C | C | C | A | C | A/C | ||||
| rs30780621 MPD | dbSNP | MGI SNP Detail | Chr1:123405178 | f | Gm15393 : Intron Htr5b : Locus-Region | 1 | SNP | G | G | G | A | G | G | G | G | G | G | A | G | G | G | G | A/G | ||||
| rs30780620 MPD | dbSNP | MGI SNP Detail | Chr1:123406489 | f | Htr5b : mRNA-UTR | 1 | SNP | A | A | A | A | A | C | A | A | C | A | A | A | A | A | A | A/C | ||||
| rs30780619 MPD | dbSNP | MGI SNP Detail | Chr1:123406568 | f | Htr5b : mRNA-UTR | 1 | SNP | A | A | A | G | A | G | A | A | G | A | G | A | A | A | A | A/G | ||||
| rs30780618 MPD | dbSNP | MGI SNP Detail | Chr1:123406829 | f | Htr5b : mRNA-UTR | 1 | SNP | C | C | C | C | C | T | C | C | T | C | C | C | C | C | C | C/T | ||||
| rs30780617 MPD | dbSNP | MGI SNP Detail | Chr1:123407217 | f | Htr5b : Coding-Synonymous | 1 | SNP | C | C | C | G | C | C | C | C | C | C | G | C | C | C | C | C/G | ||||
| rs30780616 MPD | dbSNP | MGI SNP Detail | Chr1:123407241 | f | Htr5b : Coding-Synonymous | 1 | SNP | T | T | T | C | T | C | T | T | C | T | C | T | T | C | T | C/T | ||||
| rs30780615 MPD | dbSNP | MGI SNP Detail | Chr1:123407283 | f | Htr5b : Coding-Synonymous | 1 | SNP | T | T | T | C | T | C | T | T | C | T | C | T | T | C | T | C/T | ||||
| rs30780614 MPD | dbSNP | MGI SNP Detail | Chr1:123407862 | f | Htr5b : Intron | 1 | SNP | A | A | A | G | A | A | A | A | A | A | G | A | A | A | A | A/G | ||||
| rs30779983 MPD | dbSNP | MGI SNP Detail | Chr1:123408253 | f | Htr5b : Intron | 1 | SNP | T | T | T | A | T | A | T | T | A | T | A | T | T | T | T | A/T | ||||
| rs30779982 MPD | dbSNP | MGI SNP Detail | Chr1:123408281 | f | Htr5b : Intron | 1 | SNP | T | T | T | T | T | C | T | T | C | T | T | T | T | T | T | C/T | ||||
| rs6256783 MPD | dbSNP | MGI SNP Detail | Chr1:123408532 | f | Htr5b : Intron | 1 | SNP | T | A | A/T | |||||||||||||||||
| rs6271620 MPD | dbSNP | MGI SNP Detail | Chr1:123409002 | f | Htr5b : Intron | 1 | SNP | T | G | G/T | |||||||||||||||||
| rs30944833 MPD | dbSNP | MGI SNP Detail | Chr1:123409757 | f | Htr5b : Intron | 1 | SNP | C | C | G | C | C/G | |||||||||||||||
| rs31927010 MPD | dbSNP | MGI SNP Detail | Chr1:123410841 | f | Htr5b : Intron | 1 | SNP | T | T | C | T | C/T | |||||||||||||||
| rs30804720 MPD | dbSNP | MGI SNP Detail | Chr1:123411181 | f | Htr5b : Intron | 1 | SNP | A | A | G | A | A/G | |||||||||||||||
| rs30779981 MPD | dbSNP | MGI SNP Detail | Chr1:123411713 | f | Htr5b : Intron | 1 | SNP | A | A | A | A | A | A | A | A | A | A | A | A | A | C | A | A/C | ||||
| rs33854179 MPD | dbSNP | MGI SNP Detail | Chr1:123411858 | f | Htr5b : Intron | 1 | SNP | T | T | T | T | T | A | T | T | T | T | T | T | A | T | A/T | |||||
| rs30779980 MPD | dbSNP | MGI SNP Detail | Chr1:123411977 | f | Htr5b : Intron | 1 | SNP | C | C | C | C | C | T | C | C | T | C | C | C | C | T | C | C/T | ||||
| rs31004115 MPD | dbSNP | MGI SNP Detail | Chr1:123412078 | f | Htr5b : Intron | 1 | SNP | G | C | G | C/G | ||||||||||||||||
| rs30961356 MPD | dbSNP | MGI SNP Detail | Chr1:123412862 | f | Htr5b : Intron | 1 | SNP | A | G | A/G | |||||||||||||||||
| rs30779979 MPD | dbSNP | MGI SNP Detail | Chr1:123413760 | f | Htr5b : Intron | 1 | SNP | G | G | G | G | G | A | G | G | A | G | G | G | G | A | G | A/G | ||||
| rs30779978 MPD | dbSNP | MGI SNP Detail | Chr1:123413791 | f | Htr5b : Intron | 1 | SNP | A | A | A | A | A | G | A | A | G | A | A | A | A | G | A | A/G | ||||
| SNP ID (dbSNP Build 128) | Map Position (NCBI Build 37) | | Gene : dbSNP Function Class | Assays (ss) | Variation Type | | | | | | | | | | | | | | | | | | | | Allele Summary (all strains) |
| rs30779977 MPD | dbSNP | MGI SNP Detail | Chr1:123413817 | f | Htr5b : Intron | 1 | SNP | T | T | T | T | T | C | T | T | C | T | T | T | T | C | T | C/T | ||||
| rs30779976 MPD | dbSNP | MGI SNP Detail | Chr1:123413897 | f | Htr5b : Intron | 1 | SNP | C | C | C | C | C | T | C | C | T | C | C | C | C | T | C | C/T | ||||
| rs30779975 MPD | dbSNP | MGI SNP Detail | Chr1:123414813 | f | Htr5b : Intron | 1 | SNP | C | C | C | C | C | G | C | C | G | C | C | C | C | C | C | C/G | ||||
| rs30779974 MPD | dbSNP | MGI SNP Detail | Chr1:123414888 | f | Htr5b : Intron | 1 | SNP | C | C | C | C | C | T | C | C | T | C | C | C | C | C | C | C/T | ||||
| rs30779213 MPD | dbSNP | MGI SNP Detail | Chr1:123414931 | f | Htr5b : Intron | 1 | SNP | G | G | G | G | G | C | G | G | C | G | G | G | G | G | G | C/G | ||||
| rs30779212 MPD | dbSNP | MGI SNP Detail | Chr1:123414942 | f | Htr5b : Intron | 1 | SNP | G | G | G | G | G | T | G | G | T | G | G | G | G | G | G | G/T | ||||
| rs30779211 MPD | dbSNP | MGI SNP Detail | Chr1:123415165 | f | Htr5b : Intron | 1 | SNP | G | G | G | G | G | G | G | G | G | G | A | A/G | ||||||||
| rs30779210 MPD | dbSNP | MGI SNP Detail | Chr1:123415240 | f | Htr5b : Intron | 1 | SNP | C | C | C | C | C | C | C | C | C | C | C | C | C | T | C | C/T | ||||
| rs30779209 MPD | dbSNP | MGI SNP Detail | Chr1:123415788 | f | Htr5b : Intron | 1 | SNP | A | A | A | G | A | A | G | A | A | A | A | G | A | A/G | ||||||
| rs30779208 MPD | dbSNP | MGI SNP Detail | Chr1:123416047 | f | Htr5b : Intron | 1 | SNP | A | A | A | A | A | C | A | A | C | A | A | A | A | C | A | A/C | ||||
| rs30779207 MPD | dbSNP | MGI SNP Detail | Chr1:123416076 | f | Htr5b : Intron | 1 | SNP | T | T | T | T | T | C | T | T | C | T | T | T | T | C | T | C/T | ||||
| rs30779206 MPD | dbSNP | MGI SNP Detail | Chr1:123416358 | f | Htr5b : Intron | 1 | SNP | G | G | G | G | G | G | G | G | G | G | G | G | G | G | T | G/T | ||||
| rs30779205 MPD | dbSNP | MGI SNP Detail | Chr1:123416377 | f | Htr5b : Intron | 1 | SNP | C | C | C | C | C | A | C | C | A | C | C | C | C | C | C | A/C | ||||
| rs30779204 MPD | dbSNP | MGI SNP Detail | Chr1:123416479 | f | Htr5b : Intron | 1 | SNP | G | G | G | G | G | G | G | G | G | G | G | G | G | C | G | C/G | ||||
| rs30778283 MPD | dbSNP | MGI SNP Detail | Chr1:123416524 | f | Htr5b : Intron | 1 | SNP | C | C | C | C | C | A | C | C | A | C | C | C | C | A | C | A/C | ||||
| rs30778282 MPD | dbSNP | MGI SNP Detail | Chr1:123416587 | f | Htr5b : Intron | 1 | SNP | A | A | A | A | A | C | A | A | C | A | A | A | A | A | A | A/C | ||||
| rs30778281 MPD | dbSNP | MGI SNP Detail | Chr1:123416782 | f | Htr5b : Intron | 1 | SNP | A | A | A | A | A | C | A | A | C | A | A | A | A | C | C | A/C | ||||
| rs30778280 MPD | dbSNP | MGI SNP Detail | Chr1:123416863 | f | Htr5b : Intron | 1 | SNP | A | A | A | A | A | G | A | A | G | A | A | A | A | G | G | A/G | ||||
| rs30778279 MPD | dbSNP | MGI SNP Detail | Chr1:123417167 | f | Htr5b : Intron | 1 | SNP | C | C | C | C | C | T | C | C | T | C | C | C | C | C | C | C/T | ||||
| rs30778278 MPD | dbSNP | MGI SNP Detail | Chr1:123417194 | f | Htr5b : Intron | 1 | SNP | A | A | A | A | A | A | A | A | A | A | A | A | A | G | A | A/G | ||||
| rs30778277 MPD | dbSNP | MGI SNP Detail | Chr1:123417348 | f | Htr5b : Intron | 1 | SNP | G | G | G | G | G | A | G | G | A | G | G | G | G | A | G | A/G | ||||
| rs30778276 MPD | dbSNP | MGI SNP Detail | Chr1:123417589 | f | Htr5b : Intron | 1 | SNP | A | A | A | A | A | G | A | A | G | A | A | A | A | G | G | A/G | ||||
| rs30778275 MPD | dbSNP | MGI SNP Detail | Chr1:123417647 | f | Htr5b : Intron | 1 | SNP | T | T | T | T | T | G | T | T | G | T | T | T | T | T | T | G/T | ||||
| rs30778274 MPD | dbSNP | MGI SNP Detail | Chr1:123418005 | f | Htr5b : Intron | 1 | SNP | C | C | C | C | C | C | C | C | C | C | C | C | C | G | C | C/G | ||||
| rs30777433 MPD | dbSNP | MGI SNP Detail | Chr1:123419079 | f | Htr5b : Intron | 1 | SNP | G | G | G | C | G | C | G | G | C | G | G | G | G | C | C | C/G | ||||
| SNP ID (dbSNP Build 128) | Map Position (NCBI Build 37) | | Gene : dbSNP Function Class | Assays (ss) | Variation Type | | | | | | | | | | | | | | | | | | | | Allele Summary (all strains) |
| rs30777432 MPD | dbSNP | MGI SNP Detail | Chr1:123419864 | f | Htr5b : Intron | 1 | SNP | G | G | G | G | G | G | G | G | G | G | G | G | G | T | G | G/T | ||||
| rs30777431 MPD | dbSNP | MGI SNP Detail | Chr1:123421505 | f | Htr5b : Intron | 1 | SNP | A | A | A | G | A | G | A | A | G | A | G | A | A | G | G | A/G | ||||
| rs30777430 MPD | dbSNP | MGI SNP Detail | Chr1:123421534 | f | Htr5b : Intron | 1 | SNP | C | C | C | C | C | T | C | C | T | C | C | C | C | C | C | C/T | ||||
| rs30777429 MPD | dbSNP | MGI SNP Detail | Chr1:123421792 | f | Htr5b : Intron | 2 | SNP | G | G | G | G | G | A | G | G | G | A | A | A | A/G | |||||||
| rs30777428 MPD | dbSNP | MGI SNP Detail | Chr1:123422079 | f | Htr5b : Intron | 1 | SNP | A | A | A | A | A | G | A | A | G | A | A | A | A | G | A | A/G | ||||
| rs30777427 MPD | dbSNP | MGI SNP Detail | Chr1:123422148 | f | Htr5b : Intron | 1 | SNP | C | C | C | T | C | C | C | C | C | C | T | C | C | C | C | C/T | ||||
| rs30777426 MPD | dbSNP | MGI SNP Detail | Chr1:123422637 | f | Htr5b : Intron | 1 | SNP | A | A | A | G | A | A | A | A | A | A | G | A | A | G | G | A/G | ||||
| rs30777425 MPD | dbSNP | MGI SNP Detail | Chr1:123422670 | f | Htr5b : Intron | 1 | SNP | C | C | C | T | C | C | C | C | C | C | T | C | C | C | T | C/T | ||||
| rs30777424 MPD | dbSNP | MGI SNP Detail | Chr1:123422920 | f | Htr5b : Intron | 1 | SNP | T | T | T | T | T | T | T | T | T | T | T | T | T | C | T | C/T | ||||
| rs30776473 MPD | dbSNP | MGI SNP Detail | Chr1:123423029 | f | Htr5b : Intron | 1 | SNP | C | C | C | C | C | C | C | C | C | C | C | C | C | C | A | A/C | ||||
| rs30776472 MPD | dbSNP | MGI SNP Detail | Chr1:123423040 | f | Htr5b : Intron | 1 | SNP | A | A | A | A | A | A | A | A | A | A | A | A | A | T | A | A/T | ||||
| rs30776471 MPD | dbSNP | MGI SNP Detail | Chr1:123423118 | f | Htr5b : Intron | 1 | SNP | A | A | A | A | C | A | A | C | A | A | A | C | C | A/C | ||||||
| rs30776470 MPD | dbSNP | MGI SNP Detail | Chr1:123423148 | f | Htr5b : Intron | 1 | SNP | C | C | G | C | G | G | G | C | C | G | C/G | |||||||||
| rs30776469 MPD | dbSNP | MGI SNP Detail | Chr1:123423207 | f | Htr5b : Intron | 1 | SNP | A | A | A | A | A | A | A | A | A | A | A | G | G | A | A | A/G | ||||
| rs30776468 MPD | dbSNP | MGI SNP Detail | Chr1:123423874 | f | Htr5b : Intron | 1 | SNP | G | G | G | A | G | G | G | G | G | G | G | G | G | A | A/G | |||||
| rs30776467 MPD | dbSNP | MGI SNP Detail | Chr1:123424032 | f | Htr5b : Coding-Synonymous | 1 | SNP | G | G | G | A | G | G | G | G | G | G | A | G | G | G | A | A/G | ||||
| rs30776466 MPD | dbSNP | MGI SNP Detail | Chr1:123424044 | f | Htr5b : Coding-Synonymous | 1 | SNP | T | T | T | C | T | T | T | T | T | T | C | T | T | T | C | C/T | ||||
| rs30776465 MPD | dbSNP | MGI SNP Detail | Chr1:123424089 | f | Htr5b : Coding-Synonymous | 1 | SNP | C | C | C | T | C | T | C | C | T | C | C | C | T | T | C/T | |||||
| rs4222574 MPD | dbSNP | MGI SNP Detail | Chr1:123424270 | f | Htr5b : Coding-NonSynonymous | 2 | SNP | G | G | G | G | G | G | A | G | G | A | G | G | G | G | G | G | G | A/G | ||
| rs30776464 MPD | dbSNP | MGI SNP Detail | Chr1:123424420 | f | Htr5b : Coding-NonSynonymous | 1 | SNP | A | A | A | G | A | A | A | A | A | A | G | A | A | A | G | A/G | ||||
| rs30775583 MPD | dbSNP | MGI SNP Detail | Chr1:123424459 | f | Htr5b : Coding-NonSynonymous | 1 | SNP | G | G | G | A | G | G | G | G | G | G | A | G | G | G | A | A/G | ||||
| rs30775582 MPD | dbSNP | MGI SNP Detail | Chr1:123424530 | f | Htr5b : Coding-Synonymous | 1 | SNP | A | A | A | G | A | A | A | A | A | A | G | A | A | A | G | A/G | ||||
| rs30775581 MPD | dbSNP | MGI SNP Detail | Chr1:123424576 | f | Htr5b : Coding-NonSynonymous | 1 | SNP | A | A | A | G | A | G | A | A | G | A | G | A | A | G | G | A/G | ||||
| rs30775580 MPD | dbSNP | MGI SNP Detail | Chr1:123424641 | f | Htr5b : Coding-Synonymous | 1 | SNP | A | A | A | G | A | A | A | A | A | A | G | A | A | A | G | A/G | ||||
| rs30775579 MPD | dbSNP | MGI SNP Detail | Chr1:123424710 | f | Htr5b : Coding-Synonymous | 1 | SNP | G | G | G | A | G | G | G | G | G | G | A | G | G | G | A | A/G | ||||
| SNP ID (dbSNP Build 128) | Map Position (NCBI Build 37) | | Gene : dbSNP Function Class | Assays (ss) | Variation Type | | | | | | | | | | | | | | | | | | | | Allele Summary (all strains) |
| rs30775578 MPD | dbSNP | MGI SNP Detail | Chr1:123424812 | f | Htr5b : mRNA-UTR | 1 | SNP | C | C | C | C | C | T | C | C | T | C | C | C | C | C | C | C/T | ||||
| rs30775577 MPD | dbSNP | MGI SNP Detail | Chr1:123424872 | f | Htr5b : mRNA-UTR | 1 | SNP | A | A | A | T | A | A | A | A | A | A | T | A | A | A | T | A/T | ||||
| rs30775576 MPD | dbSNP | MGI SNP Detail | Chr1:123424949 | f | Htr5b : mRNA-UTR | 1 | SNP | C | C | C | T | C | C | C | C | C | C | T | C | C | C | T | C/T | ||||
| rs30775575 MPD | dbSNP | MGI SNP Detail | Chr1:123425083 | f | Htr5b : Locus-Region | 1 | SNP | A | A | A | G | A | A | A | A | A | A | G | A | A | A | G | A/G | ||||
| rs30775574 MPD | dbSNP | MGI SNP Detail | Chr1:123425104 | f | Htr5b : Locus-Region | 1 | SNP | A | A | A | A | A | A | A | A | A | A | A | C | A/C | |||||||
| rs30774753 MPD | dbSNP | MGI SNP Detail | Chr1:123425114 | f | Htr5b : Locus-Region | 1 | SNP | G | G | G | C | G | G | G | G | G | G | C | G | G | G | C | C/G | ||||
| rs30774752 MPD | dbSNP | MGI SNP Detail | Chr1:123425415 | f | Htr5b : Locus-Region | 1 | SNP | T | T | T | G | T | G | T | T | G | T | G | T | T | G | G | G/T | ||||
| rs30774751 MPD | dbSNP | MGI SNP Detail | Chr1:123425457 | f | Htr5b : Locus-Region | 1 | SNP | A | A | A | G | A | A | A | A | A | A | G | A/G | ||||||||
| rs30774750 MPD | dbSNP | MGI SNP Detail | Chr1:123425475 | f | Htr5b : Locus-Region | 1 | SNP | C | C | C | C | T | C | C | T | C | C | C | T | C/T | |||||||
| rs30774749 MPD | dbSNP | MGI SNP Detail | Chr1:123425507 | f | Htr5b : Locus-Region | 1 | SNP | A | A | A | C | A | A | A | A | A | A | C | A | A | A | C | A/C | ||||
| rs30774748 MPD | dbSNP | MGI SNP Detail | Chr1:123425534 | f | Htr5b : Locus-Region | 1 | SNP | A | A | A | G | A | G | A | A | G | A | A | A | G | A/G |
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc |
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last database update 05/22/2013 MGI 5.13 |
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