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Genome
Coordinate Discrepancy The genome coordinates for mouse SNPs are derived from a different NCBI build of the mouse genome than are the genome coordinates for MGI genes. (see details). |
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Symbol Name ID |
Rsph4a radial spoke head 4 homolog A (Chlamydomonas) MGI:3027894 |
| SNP ID (dbSNP Build 128) | Map Position (NCBI Build 37) |  | Gene : dbSNP Function Class | Assays (ss) | Variation Type |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | Allele Summary (all strains) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| rs33798394 MPD | dbSNP | MGI SNP Detail | Chr10:33623558 | f | Rsph4a : Locus-Region | 1 | SNP | G | G | G | G | G | G | G | G | G | G | G | G | T | G | G/T | |||
| rs33798396 MPD | dbSNP | MGI SNP Detail | Chr10:33623626 | f | Rsph4a : Locus-Region | 1 | SNP | T | T | T | T | T | C | T | C | T | T | T | C | T | C/T | ||||
| rs33798398 MPD | dbSNP | MGI SNP Detail | Chr10:33623749 | f | Rsph4a : Locus-Region | 1 | SNP | T | T | T | T | T | A | T | T | A | T | T | T | A | T | A/T | |||
| rs33798400 MPD | dbSNP | MGI SNP Detail | Chr10:33623964 | f | Rsph4a : Locus-Region | 1 | SNP | G | G | G | G | G | G | G | G | A | G | G | G | G | A | G | A/G | ||
| rs33798402 MPD | dbSNP | MGI SNP Detail | Chr10:33624001 | f | Rsph4a : Locus-Region | 1 | SNP | T | T | T | T | T | A | T | T | T | T | T | T | A/T | |||||
| rs33799214 MPD | dbSNP | MGI SNP Detail | Chr10:33624171 | f | Rsph4a : Locus-Region | 1 | SNP | A | A | A | A | A | G | A | A | G | A | A | A | G | A | A/G | |||
| rs33799216 MPD | dbSNP | MGI SNP Detail | Chr10:33624252 | f | Rsph4a : Locus-Region | 1 | SNP | C | C | C | C | C | T | C | C | C | C | C | C | C | C | C | C/T | ||
| rs33799218 MPD | dbSNP | MGI SNP Detail | Chr10:33624733 | f | Rsph4a : Locus-Region | 1 | SNP | G | G | G | G | G | A | G | G | G | G | G | G | G | G | G | A/G | ||
| rs33799220 MPD | dbSNP | MGI SNP Detail | Chr10:33624868 | f | Rsph4a : Locus-Region | 1 | SNP | T | T | T | T | T | C | T | T | C | T | T | T | T | C | T | C/T | ||
| rs33799222 MPD | dbSNP | MGI SNP Detail | Chr10:33624882 | f | Rsph4a : Locus-Region | 1 | SNP | T | T | T | T | T | A | T | T | T | T | T | T | T | T | A/T | |||
| rs33800104 MPD | dbSNP | MGI SNP Detail | Chr10:33625286 | f | Rsph4a : Coding-NonSynonymous | 1 | SNP | A | A | A | A | A | G | A | A | G | A | A | A | G | A | A/G | |||
| rs33800106 MPD | dbSNP | MGI SNP Detail | Chr10:33625298 | f | Rsph4a : Coding-NonSynonymous | 1 | SNP | G | G | G | G | G | G | G | G | G | G | G | G | G | A | G | A/G | ||
| rs33800108 MPD | dbSNP | MGI SNP Detail | Chr10:33625319 | f | Rsph4a : Coding-NonSynonymous | 1 | SNP | G | G | G | G | G | G | G | G | C | G | G | G | C | G | C/G | |||
| rs33800110 MPD | dbSNP | MGI SNP Detail | Chr10:33625504 | f | Rsph4a : Coding-Synonymous | 1 | SNP | A | A | A | A | A | A | A | A | G | A | A | A | A | G | A | A/G | ||
| rs33800112 MPD | dbSNP | MGI SNP Detail | Chr10:33625579 | f | Rsph4a : Coding-Synonymous | 1 | SNP | T | T | T | T | T | C | T | T | T | T | T | T | T | T | T | C/T | ||
| rs33800824 MPD | dbSNP | MGI SNP Detail | Chr10:33625904 | f | Rsph4a : Intron | 1 | SNP | G | G | G | G | G | A | G | G | G | G | G | G | G | G | G | A/G | ||
| rs33800826 MPD | dbSNP | MGI SNP Detail | Chr10:33626247 | f | Rsph4a : Intron | 1 | SNP | A | A | A | A | A | G | A | A | A | A | A | A | A | A | A | A/G | ||
| rs33800828 MPD | dbSNP | MGI SNP Detail | Chr10:33626308 | f | Rsph4a : Intron | 1 | SNP | T | T | T | T | T | C | T | T | T | T | T | T | T | T | T | C/T | ||
| rs33800830 MPD | dbSNP | MGI SNP Detail | Chr10:33626452 | f | Rsph4a : Intron | 1 | SNP | A | A | A | A | A | G | A | A | G | A | A | A | A | G | A | A/G | ||
| rs33800832 MPD | dbSNP | MGI SNP Detail | Chr10:33626479 | f | Rsph4a : Intron | 1 | SNP | A | A | A | A | A | A | A | A | A | A | A | A | A | G | A | A/G | ||
| rs33801634 MPD | dbSNP | MGI SNP Detail | Chr10:33626719 | f | Rsph4a : Intron | 1 | SNP | C | C | C | C | C | T | C | C | T | C | C | C | C | T | C | C/T | ||
| rs33801636 MPD | dbSNP | MGI SNP Detail | Chr10:33626777 | f | Rsph4a : Intron | 1 | SNP | T | T | T | T | T | C | T | T | T | T | T | T | T | T | T | C/T | ||
| rs33801638 MPD | dbSNP | MGI SNP Detail | Chr10:33627780 | f | Rsph4a : Intron | 1 | SNP | T | T | T | T | T | T | T | T | A | T | T | T | T | T | T | A/T | ||
| rs33801640 MPD | dbSNP | MGI SNP Detail | Chr10:33628187 | f | Rsph4a : Intron | 1 | SNP | C | C | C | C | C | T | C | C | C | C | C | C | C | C | C | C/T | ||
| rs33801642 MPD | dbSNP | MGI SNP Detail | Chr10:33628215 | f | Rsph4a : Intron | 1 | SNP | A | A | A | A | A | G | A | A | G | A | A | A | A | G | A | A/G | ||
| SNP ID (dbSNP Build 128) | Map Position (NCBI Build 37) | | Gene : dbSNP Function Class | Assays (ss) | Variation Type | | | | | | | | | | | | | | | | | | Allele Summary (all strains) |
| rs33802524 MPD | dbSNP | MGI SNP Detail | Chr10:33628888 | f | Rsph4a : Coding-NonSynonymous | 1 | SNP | A | A | A | A | A | T | A | A | A | A | A | A | A | A | A | A/T | ||
| rs33802526 MPD | dbSNP | MGI SNP Detail | Chr10:33629873 | f | Rsph4a : Intron | 1 | SNP | G | G | G | G | A | G | G | G | G | G | G | G | G | G | A/G | |||
| rs33802528 MPD | dbSNP | MGI SNP Detail | Chr10:33630337 | f | Rsph4a : Intron | 1 | SNP | C | C | C | C | C | G | C | C | C | C | C | G | C | C/G | ||||
| rs33802530 MPD | dbSNP | MGI SNP Detail | Chr10:33630782 | f | Rsph4a : Intron | 1 | SNP | A | A | A | A | A | T | A | A | A | A | A | A | A | A | A | A/T | ||
| rs33802532 MPD | dbSNP | MGI SNP Detail | Chr10:33630832 | f | Rsph4a : Intron | 1 | SNP | G | G | G | G | G | A | G | G | A | G | G | G | G | A | G | A/G | ||
| rs33795135 MPD | dbSNP | MGI SNP Detail | Chr10:33631010 | f | Rsph4a : Intron | 1 | SNP | C | C | C | C | C | A | C | C | C | C | C | C | C | C | C | A/C | ||
| rs33795137 MPD | dbSNP | MGI SNP Detail | Chr10:33631127 | f | Rsph4a : Intron | 1 | SNP | A | A | A | A | A | G | A | A | G | A | A | A | A | G | A | A/G | ||
| rs33795139 MPD | dbSNP | MGI SNP Detail | Chr10:33631166 | f | Rsph4a : Intron | 1 | SNP | G | G | G | G | G | A | G | G | G | G | G | G | G | G | G | A/G | ||
| rs33795141 MPD | dbSNP | MGI SNP Detail | Chr10:33631188 | f | Rsph4a : Intron | 1 | SNP | T | T | T | T | T | T | T | T | T | T | T | T | C | T | C/T | |||
| rs33795143 MPD | dbSNP | MGI SNP Detail | Chr10:33631223 | f | Rsph4a : Intron | 1 | SNP | A | A | A | A | A | C | A | A | C | A | A | A | A | C | A | A/C | ||
| rs33795865 MPD | dbSNP | MGI SNP Detail | Chr10:33631290 | f | Rsph4a : Intron | 1 | SNP | T | T | T | T | T | A | T | T | A | T | T | T | T | A | T | A/T | ||
| rs33795867 MPD | dbSNP | MGI SNP Detail | Chr10:33631309 | f | Rsph4a : Intron | 1 | SNP | C | C | C | C | C | C | C | C | C | C | C | C | C | T | C | C/T | ||
| rs33795869 MPD | dbSNP | MGI SNP Detail | Chr10:33631807 | f | Rsph4a : Intron | 1 | SNP | T | T | T | T | T | C | T | T | T | T | T | T | T | T | T | C/T | ||
| rs33795871 MPD | dbSNP | MGI SNP Detail | Chr10:33632706 | f | Rsph4a : Intron | 1 | SNP | G | G | G | G | G | G | G | G | A | G | G | G | G | A | G | A/G | ||
| rs33795873 MPD | dbSNP | MGI SNP Detail | Chr10:33632996 | f | Rsph4a : Intron | 1 | SNP | C | C | C | C | C | T | C | C | C | C | C | C | C | C | C | C/T | ||
| rs33796545 MPD | dbSNP | MGI SNP Detail | Chr10:33633041 | f | Rsph4a : Intron | 1 | SNP | A | A | A | A | A | G | A | A | G | A | A | A | A | G | A | A/G | ||
| rs33796547 MPD | dbSNP | MGI SNP Detail | Chr10:33633106 | f | Rsph4a : Intron | 1 | SNP | C | C | C | C | C | C | C | C | T | C | C | C | C | T | C | C/T | ||
| rs33796549 MPD | dbSNP | MGI SNP Detail | Chr10:33633153 | f | Rsph4a : Intron | 1 | SNP | A | A | A | A | A | C | A | A | A | A | A | A | A | A | A | A/C | ||
| rs33796551 MPD | dbSNP | MGI SNP Detail | Chr10:33633401 | f | Rsph4a : Intron | 1 | SNP | A | A | A | A | A | A | A | A | G | A | A | A | A | G | A | A/G | ||
| rs33796553 MPD | dbSNP | MGI SNP Detail | Chr10:33633430 | f | Rsph4a : Intron | 1 | SNP | C | C | C | C | C | C | C | C | G | C | C | C | C | G | C | C/G | ||
| rs33797225 MPD | dbSNP | MGI SNP Detail | Chr10:33633872 | f | Rsph4a : Intron | 1 | SNP | A | A | A | A | A | G | A | A | A | A | A | A | A | A | A/G | |||
| rs33797227 MPD | dbSNP | MGI SNP Detail | Chr10:33633888 | f | Rsph4a : Intron | 1 | SNP | A | A | A | A | A | G | A | A | G | A | A | A | A | G | A | A/G | ||
| rs33797229 MPD | dbSNP | MGI SNP Detail | Chr10:33633936 | f | Rsph4a : Intron | 1 | SNP | A | A | A | A | A | G | A | A | A | A | A | A | A | A | A | A/G | ||
| rs33797231 MPD | dbSNP | MGI SNP Detail | Chr10:33634338 | f | Rsph4a : Coding-NonSynonymous | 1 | SNP | G | G | G | G | G | G | G | G | A | G | G | G | G | G | G | A/G | ||
| rs33797233 MPD | dbSNP | MGI SNP Detail | Chr10:33634364 | f | Rsph4a : Coding-Synonymous | 1 | SNP | T | T | T | T | T | C | T | T | T | T | T | T | T | T | T | C/T | ||
| SNP ID (dbSNP Build 128) | Map Position (NCBI Build 37) | | Gene : dbSNP Function Class | Assays (ss) | Variation Type | | | | | | | | | | | | | | | | | | Allele Summary (all strains) |
| rs29319976 MPD | dbSNP | MGI SNP Detail | Chr10:33635583 | f | Rsph4a : mRNA-UTR | 2 | SNP | G | G | C | G | C | G | G | G | G | G | G | G | G | G | G | G | G | C/G |
| rs33798316 MPD | dbSNP | MGI SNP Detail | Chr10:33635637 | f | Rsph4a : mRNA-UTR | 1 | SNP | C | C | C | C | C | T | C | C | C | C | C | C | C | C | C | C/T | ||
| rs33798318 MPD | dbSNP | MGI SNP Detail | Chr10:33635732 | f | Rsph4a : mRNA-UTR | 1 | SNP | T | T | T | T | T | C | T | T | C | T | T | T | T | C | T | C/T |
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc |
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last database update 05/08/2013 MGI 5.13 |
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