About   Help   FAQ
Gene Expression Data
Query Results -- Details
Reference: J:153498 Diez-Roux G, PLoS Biol 2011;9(1):e1000582
Assay type: RNA in situ
MGI Accession ID: MGI:4827910
Gene symbol: Scrg1
Gene name: scrapie responsive gene 1
Modification date: 09/14/2010
Probe: MGC clone 67121
Probe preparation: Antisense RNA labelled with digoxigenin
Visualized with: Alkaline phosphatase
Assay notes: Cryosections of fresh frozen material were fixed in 4% paraformaldehyde for 20 min. before further processing. A tyramide-biotin/streptavidin amplification step was included in the in situ hybridization procedure.
Specimens Used
euxassay_007430_02 euxassay_007430_03 euxassay_007430_04 euxassay_007430_05 euxassay_007430_06 euxassay_007430_07 euxassay_007430_08 euxassay_007430_09 euxassay_007430_10 euxassay_007430_11 euxassay_007430_12 euxassay_007430_13 euxassay_007430_14 euxassay_007430_15 euxassay_007430_16 euxassay_007430_17 euxassay_007430_18 euxassay_007430_19 euxassay_007430_20 euxassay_007430_21 euxassay_007430_22 euxassay_007430_23 euxassay_007430_24
Genetic Background C57BL/6 C57BL/6 C57BL/6 C57BL/6 C57BL/6 C57BL/6 C57BL/6 C57BL/6 C57BL/6 C57BL/6 C57BL/6 C57BL/6 C57BL/6 C57BL/6 C57BL/6 C57BL/6 C57BL/6 C57BL/6 C57BL/6 C57BL/6 C57BL/6 C57BL/6 C57BL/6
Mutant Allele(s)                                              
Age E 14.5 E 14.5 E 14.5 E 14.5 E 14.5 E 14.5 E 14.5 E 14.5 E 14.5 E 14.5 E 14.5 E 14.5 E 14.5 E 14.5 E 14.5 E 14.5 E 14.5 E 14.5 E 14.5 E 14.5 E 14.5 E 14.5 E 14.5
Sex Not Specified Not Specified Not Specified Not Specified Not Specified Not Specified Not Specified Not Specified Not Specified Not Specified Not Specified Not Specified Not Specified Not Specified Not Specified Not Specified Not Specified Not Specified Not Specified Not Specified Not Specified Not Specified Not Specified
Type section section section section section section section section section section section section section section section section section section section section section section section
Fixation Fresh Frozen Fresh Frozen Fresh Frozen Fresh Frozen Fresh Frozen Fresh Frozen Fresh Frozen Fresh Frozen Fresh Frozen Fresh Frozen Fresh Frozen Fresh Frozen Fresh Frozen Fresh Frozen Fresh Frozen Fresh Frozen Fresh Frozen Fresh Frozen Fresh Frozen Fresh Frozen Fresh Frozen Fresh Frozen Fresh Frozen
Embedding Cryosection Cryosection Cryosection Cryosection Cryosection Cryosection Cryosection Cryosection Cryosection Cryosection Cryosection Cryosection Cryosection Cryosection Cryosection Cryosection Cryosection Cryosection Cryosection Cryosection Cryosection Cryosection Cryosection
Results: euxassay_007430_02 (embryonic day 14.5; C57BL/6)
Structure Level Pattern Image images
TS23: orbitosphenoid bone Moderate Regionally restricted Figure euxassay_007430_02
TS23: chondrocranium temporal bone Weak Regionally restricted Figure euxassay_007430_02
Results: euxassay_007430_03 (embryonic day 14.5; C57BL/6)
Structure Level Pattern Image images
TS23: orbitosphenoid bone Moderate Regionally restricted Figure euxassay_007430_03
TS23: chondrocranium temporal bone Weak Regionally restricted Figure euxassay_007430_03
Results: euxassay_007430_04 (embryonic day 14.5; C57BL/6)
Structure Level Pattern Image images
TS23: digit 2 metatarsus Moderate Regionally restricted Figure euxassay_007430_04
TS23: digit 4 metatarsus Moderate Regionally restricted Figure euxassay_007430_04
TS23: digit 3 metatarsus Moderate Regionally restricted Figure euxassay_007430_04
TS23: digit 5 metatarsus Moderate Regionally restricted Figure euxassay_007430_04
TS23: orbitosphenoid bone Moderate Regionally restricted Figure euxassay_007430_04
TS23: chondrocranium temporal bone Moderate Regionally restricted Figure euxassay_007430_04
Results: euxassay_007430_05 (embryonic day 14.5; C57BL/6)
Structure Level Pattern Image images
TS23: digit 1 metatarsus Moderate Regionally restricted Figure euxassay_007430_05
TS23: digit 2 metatarsus Moderate Regionally restricted Figure euxassay_007430_05
TS23: digit 3 metatarsus Moderate Regionally restricted Figure euxassay_007430_05
TS23: digit 4 metatarsus Moderate Regionally restricted Figure euxassay_007430_05
TS23: left lung Moderate Spotted Figure euxassay_007430_05
TS23: orbitosphenoid bone Moderate Regionally restricted Figure euxassay_007430_05
TS23: chondrocranium temporal bone Moderate Regionally restricted Figure euxassay_007430_05
TS23: trigeminal V ganglion Moderate Single cells Figure euxassay_007430_05
Results: euxassay_007430_06 (embryonic day 14.5; C57BL/6)
Structure Level Pattern Image images
TS23: hindlimb digit 1 phalanx Moderate Regionally restricted Figure euxassay_007430_06
TS23: hindlimb digit 2 phalanx Moderate Regionally restricted Figure euxassay_007430_06
TS23: hindlimb digit 3 phalanx Moderate Regionally restricted Figure euxassay_007430_06
TS23: left lung Strong Spotted Figure euxassay_007430_06
TS23: orbitosphenoid bone Moderate Regionally restricted Figure euxassay_007430_06
TS23: chondrocranium temporal bone Moderate Regionally restricted Figure euxassay_007430_06
TS23: trigeminal V ganglion Moderate Single cells Figure euxassay_007430_06
Results: euxassay_007430_07 (embryonic day 14.5; C57BL/6)
Structure Level Pattern Image images
TS23: hindlimb digit 3 phalanx Moderate Regionally restricted Figure euxassay_007430_07
TS23: hindlimb digit 4 phalanx Moderate Regionally restricted Figure euxassay_007430_07
TS23: hindlimb digit 5 phalanx Moderate Regionally restricted Figure euxassay_007430_07
TS23: left lung Strong Spotted Figure euxassay_007430_07
TS23: orbitosphenoid bone Moderate Regionally restricted Figure euxassay_007430_07
TS23: trigeminal V ganglion Moderate Single cells Figure euxassay_007430_07
Results: euxassay_007430_08 (embryonic day 14.5; C57BL/6)
Structure Level Pattern Image images
TS23: left lung Strong Spotted Figure euxassay_007430_08
TS23: orbitosphenoid bone Moderate Regionally restricted Figure euxassay_007430_08
TS23: viscerocranium turbinate Moderate Regionally restricted Figure euxassay_007430_08
TS23: trigeminal V ganglion Moderate Single cells Figure euxassay_007430_08
TS23: glossopharyngeal IX ganglion Moderate Single cells Figure euxassay_007430_08
Results: euxassay_007430_09 (embryonic day 14.5; C57BL/6)
Structure Level Pattern Image images
TS23: left lung Strong Spotted Figure euxassay_007430_09
TS23: orbitosphenoid bone Moderate Regionally restricted Figure euxassay_007430_09
TS23: viscerocranium turbinate Moderate Regionally restricted Figure euxassay_007430_09
TS23: trigeminal V ganglion Moderate Single cells Figure euxassay_007430_09
TS23: glossopharyngeal IX ganglion Moderate Single cells Figure euxassay_007430_09
Results: euxassay_007430_10 (embryonic day 14.5; C57BL/6)
Structure Level Pattern Image images
TS23: left lung Strong Spotted Figure euxassay_007430_10
TS23: viscerocranium turbinate Moderate Regionally restricted Figure euxassay_007430_10
TS23: trigeminal V ganglion Moderate Single cells Figure euxassay_007430_10
Results: euxassay_007430_11 (embryonic day 14.5; C57BL/6)
Structure Level Pattern Image images
TS23: left lung Strong Spotted Figure euxassay_007430_11
TS23: nasal septum Strong Regionally restricted Figure euxassay_007430_11
Results: euxassay_007430_12 (embryonic day 14.5; C57BL/6)
Structure Level Pattern Image images
TS23: left lung Strong Spotted Figure euxassay_007430_12
TS23: axial skeleton tail region Moderate Regionally restricted Figure euxassay_007430_12
TS23: nasal septum Strong Regionally restricted Figure euxassay_007430_12
Results: euxassay_007430_13 (embryonic day 14.5; C57BL/6)
Structure Level Pattern Image images
TS23: left lung Strong Spotted Figure euxassay_007430_13
TS23: axial skeleton tail region Strong Regionally restricted Figure euxassay_007430_13
TS23: nasal septum Strong Regionally restricted Figure euxassay_007430_13
Results: euxassay_007430_14 (embryonic day 14.5; C57BL/6)
Structure Level Pattern Image images
TS23: right lung Strong Spotted Figure euxassay_007430_14
TS23: oesophagus Moderate Regionally restricted Figure euxassay_007430_14
TS23: axial skeleton tail region Moderate Regionally restricted Figure euxassay_007430_14
TS23: nasal septum Strong Regionally restricted Figure euxassay_007430_14
TS23: sternum Strong Regionally restricted Figure euxassay_007430_14
Results: euxassay_007430_15 (embryonic day 14.5; C57BL/6)
Structure Level Pattern Image images
TS23: right lung Strong Spotted Figure euxassay_007430_15
TS23: oesophagus Moderate Regionally restricted Figure euxassay_007430_15
TS23: nasal septum Strong Regionally restricted Figure euxassay_007430_15
TS23: sternum Strong Regionally restricted Figure euxassay_007430_15
Results: euxassay_007430_16 (embryonic day 14.5; C57BL/6)
Structure Level Pattern Image images
TS23: right lung Strong Spotted Figure euxassay_007430_16
TS23: nasal septum Strong Regionally restricted Figure euxassay_007430_16
Results: euxassay_007430_17 (embryonic day 14.5; C57BL/6)
Structure Level Pattern Image images
TS23: hindlimb digit 2 phalanx Moderate Regionally restricted Figure euxassay_007430_17
TS23: hindlimb digit 3 phalanx Moderate Regionally restricted Figure euxassay_007430_17
TS23: hindlimb digit 4 phalanx Moderate Regionally restricted Figure euxassay_007430_17
TS23: right lung Strong Spotted Figure euxassay_007430_17
TS23: orbitosphenoid bone Moderate Regionally restricted Figure euxassay_007430_17
Results: euxassay_007430_18 (embryonic day 14.5; C57BL/6)
Structure Level Pattern Image images
TS23: hindlimb digit 2 phalanx Moderate Regionally restricted Figure euxassay_007430_18
TS23: hindlimb digit 3 phalanx Moderate Regionally restricted Figure euxassay_007430_18
TS23: hindlimb digit 4 phalanx Moderate Regionally restricted Figure euxassay_007430_18
TS23: right lung Strong Spotted Figure euxassay_007430_18
TS23: orbitosphenoid bone Moderate Regionally restricted Figure euxassay_007430_18
TS23: viscerocranium turbinate Moderate Regionally restricted Figure euxassay_007430_18
TS23: trigeminal V ganglion Moderate Single cells Figure euxassay_007430_18
Results: euxassay_007430_19 (embryonic day 14.5; C57BL/6)
Structure Level Pattern Image images
TS23: hindlimb digit 1 phalanx Moderate Regionally restricted Figure euxassay_007430_19
TS23: hindlimb digit 2 phalanx Moderate Regionally restricted Figure euxassay_007430_19
TS23: hindlimb digit 3 phalanx Moderate Regionally restricted Figure euxassay_007430_19
TS23: right lung Moderate Spotted Figure euxassay_007430_19
TS23: viscerocranium turbinate Moderate Regionally restricted Figure euxassay_007430_19
TS23: orbitosphenoid bone Moderate Regionally restricted Figure euxassay_007430_19
TS23: trigeminal V ganglion Moderate Single cells Figure euxassay_007430_19
Results: euxassay_007430_20 (embryonic day 14.5; C57BL/6)
Structure Level Pattern Image images
TS23: right lung Strong Spotted Figure euxassay_007430_20
TS23: orbitosphenoid bone Moderate Regionally restricted Figure euxassay_007430_20
TS23: trigeminal V ganglion Moderate Single cells Figure euxassay_007430_20
TS23: glossopharyngeal IX ganglion Moderate Single cells Figure euxassay_007430_20
Results: euxassay_007430_21 (embryonic day 14.5; C57BL/6)
Structure Level Pattern Image images
TS23: digit 1 metatarsus Strong Regionally restricted Figure euxassay_007430_21
TS23: digit 2 metatarsus Strong Regionally restricted Figure euxassay_007430_21
TS23: digit 3 metatarsus Strong Regionally restricted Figure euxassay_007430_21
TS23: digit 4 metatarsus Strong Regionally restricted Figure euxassay_007430_21
TS23: right lung Strong Spotted Figure euxassay_007430_21
TS23: orbitosphenoid bone Moderate Regionally restricted Figure euxassay_007430_21
TS23: chondrocranium temporal bone Moderate Regionally restricted Figure euxassay_007430_21
TS23: glossopharyngeal IX ganglion Moderate Single cells Figure euxassay_007430_21
TS23: trigeminal V ganglion Moderate Single cells Figure euxassay_007430_21
Results: euxassay_007430_22 (embryonic day 14.5; C57BL/6)
Structure Level Pattern Image images
TS23: digit 2 metatarsus Strong Regionally restricted Figure euxassay_007430_22
TS23: digit 3 metatarsus Strong Regionally restricted Figure euxassay_007430_22
TS23: right lung Strong Spotted Figure euxassay_007430_22
TS23: orbitosphenoid bone Moderate Regionally restricted Figure euxassay_007430_22
TS23: chondrocranium temporal bone Moderate Regionally restricted Figure euxassay_007430_22
TS23: trigeminal V ganglion Moderate Single cells Figure euxassay_007430_22
Results: euxassay_007430_23 (embryonic day 14.5; C57BL/6)
Structure Level Pattern Image images
TS23: right lung Strong Spotted Figure euxassay_007430_23
TS23: orbitosphenoid bone Moderate Regionally restricted Figure euxassay_007430_23
TS23: chondrocranium temporal bone Moderate Regionally restricted Figure euxassay_007430_23
TS23: trigeminal V ganglion Moderate Single cells Figure euxassay_007430_23
Results: euxassay_007430_24 (embryonic day 14.5; C57BL/6)
Structure Level Pattern Image images
TS23: right lung Strong Spotted Figure euxassay_007430_24
TS23: orbitosphenoid bone Moderate Regionally restricted Figure euxassay_007430_24
TS23: chondrocranium temporal bone Moderate Regionally restricted Figure euxassay_007430_24
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
Warranty Disclaimer & Copyright Notice
Send questions and comments to User Support. 		last database update
05/22/2013
MGI 5.13 		The Jackson Laboratory