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Gene Expression Data
Query Results -- Details

Reference: J:153498 Diez-Roux G, PLoS Biol 2011;9(1):e1000582
Assay type: RNA in situ
MGI Accession ID: MGI:4827065
Gene symbol: Pax6
Gene name: paired box gene 6
Modification date: 09/14/2010
Probe: MH454 probe 390
Probe preparation: Antisense RNA labelled with digoxigenin
Visualized with: Alkaline phosphatase
Assay notes: Cryosections of fresh frozen material were fixed in 4% paraformaldehyde for 20 min. before further processing. A tyramide-biotin/streptavidin amplification step was included in the in situ hybridization procedure.
Specimens Used
euxassay_017942_01 euxassay_017942_02 euxassay_017942_03 euxassay_017942_04 euxassay_017942_05 euxassay_017942_06 euxassay_017942_07 euxassay_017942_08 euxassay_017942_09 euxassay_017942_10 euxassay_017942_11 euxassay_017942_12 euxassay_017942_13 euxassay_017942_14 euxassay_017942_15 euxassay_017942_16 euxassay_017942_17 euxassay_017942_18 euxassay_017942_19 euxassay_017942_20 euxassay_017942_21 euxassay_017942_22 euxassay_017942_23 euxassay_017942_24
Genetic Background Not Specified Not Specified Not Specified Not Specified Not Specified Not Specified Not Specified Not Specified Not Specified Not Specified Not Specified Not Specified Not Specified Not Specified Not Specified Not Specified Not Specified Not Specified Not Specified Not Specified Not Specified Not Specified Not Specified Not Specified
Mutant Allele(s)                                                
Age E 14.5 E 14.5 E 14.5 E 14.5 E 14.5 E 14.5 E 14.5 E 14.5 E 14.5 E 14.5 E 14.5 E 14.5 E 14.5 E 14.5 E 14.5 E 14.5 E 14.5 E 14.5 E 14.5 E 14.5 E 14.5 E 14.5 E 14.5 E 14.5
Sex Not Specified Not Specified Not Specified Not Specified Not Specified Not Specified Not Specified Not Specified Not Specified Not Specified Not Specified Not Specified Not Specified Not Specified Not Specified Not Specified Not Specified Not Specified Not Specified Not Specified Not Specified Not Specified Not Specified Not Specified
Type section section section section section section section section section section section section section section section section section section section section section section section section
Fixation Fresh Frozen Fresh Frozen Fresh Frozen Fresh Frozen Fresh Frozen Fresh Frozen Fresh Frozen Fresh Frozen Fresh Frozen Fresh Frozen Fresh Frozen Fresh Frozen Fresh Frozen Fresh Frozen Fresh Frozen Fresh Frozen Fresh Frozen Fresh Frozen Fresh Frozen Fresh Frozen Fresh Frozen Fresh Frozen Fresh Frozen Fresh Frozen
Embedding Cryosection Cryosection Cryosection Cryosection Cryosection Cryosection Cryosection Cryosection Cryosection Cryosection Cryosection Cryosection Cryosection Cryosection Cryosection Cryosection Cryosection Cryosection Cryosection Cryosection Cryosection Cryosection Cryosection Cryosection

Results: euxassay_017942_01 (embryonic day 14.5)
Structure Level Pattern Image images
TS23: neural retina Strong Regionally restricted Figure euxassay_017942_01
TS23: cornea epithelium Strong Regionally restricted Figure euxassay_017942_01

Results: euxassay_017942_02 (embryonic day 14.5)
Structure Level Pattern Image images
TS23: neural retina Strong Regionally restricted Figure euxassay_017942_02
TS23: lung Moderate Regionally restricted Figure euxassay_017942_02
TS23: telencephalon ventricular layer Strong Regionally restricted Figure euxassay_017942_02
TS23: telencephalon mantle layer Strong Regionally restricted Figure euxassay_017942_02

Results: euxassay_017942_03 (embryonic day 14.5)
Structure Level Pattern Image images
TS23: lung Moderate Regionally restricted Figure euxassay_017942_03
TS23: telencephalon ventricular layer Strong Regionally restricted Figure euxassay_017942_03
TS23: telencephalon mantle layer Strong Regionally restricted Figure euxassay_017942_03

Results: euxassay_017942_04 (embryonic day 14.5)
Structure Level Pattern Image images
TS23: lung Moderate Regionally restricted Figure euxassay_017942_04
TS23: telencephalon ventricular layer Strong Regionally restricted Figure euxassay_017942_04
TS23: telencephalon mantle layer Strong Regionally restricted Figure euxassay_017942_04

Results: euxassay_017942_05 (embryonic day 14.5)
Structure Level Pattern Image images
TS23: olfactory epithelium Strong Regionally restricted Figure euxassay_017942_05
TS23: lung Weak Regionally restricted Figure euxassay_017942_05
TS23: spinal cord ventral grey horn Strong Single cells Figure euxassay_017942_05
TS23: spinal cord intermediate grey horn Strong Single cells Figure euxassay_017942_05
TS23: rest of cerebellum ventricular layer Strong Regionally restricted Figure euxassay_017942_05
TS23: rest of cerebellum marginal layer Strong Regionally restricted Figure euxassay_017942_05
TS23: telencephalon ventricular layer Strong Regionally restricted Figure euxassay_017942_05
TS23: telencephalon mantle layer Strong Regionally restricted Figure euxassay_017942_05

Results: euxassay_017942_06 (embryonic day 14.5)
Structure Level Pattern Image images
TS23: olfactory epithelium Strong Regionally restricted Figure euxassay_017942_06
TS23: lung Moderate Regionally restricted Figure euxassay_017942_06
TS23: spinal cord ventral grey horn Strong Single cells Figure euxassay_017942_06
TS23: spinal cord intermediate grey horn Strong Single cells Figure euxassay_017942_06
TS23: rest of cerebellum ventricular layer Strong Regionally restricted Figure euxassay_017942_06
TS23: rest of cerebellum marginal layer Strong Regionally restricted Figure euxassay_017942_06
TS23: telencephalon ventricular layer Strong Regionally restricted Figure euxassay_017942_06
TS23: telencephalon mantle layer Strong Regionally restricted Figure euxassay_017942_06

Results: euxassay_017942_07 (embryonic day 14.5)
Structure Level Pattern Image images
TS23: olfactory epithelium Moderate Regionally restricted Figure euxassay_017942_07
TS23: lung Moderate Regionally restricted Figure euxassay_017942_07
TS23: pericardium Moderate Spotted Figure euxassay_017942_07
TS23: spinal cord ventral grey horn Strong Single cells Figure euxassay_017942_07
TS23: spinal cord ventricular layer Strong Single cells Figure euxassay_017942_07
TS23: rest of cerebellum ventricular layer Strong Regionally restricted Figure euxassay_017942_07
TS23: rest of cerebellum marginal layer Strong Regionally restricted Figure euxassay_017942_07
TS23: telencephalon ventricular layer Strong Regionally restricted Figure euxassay_017942_07
TS23: olfactory cortex ventricular layer Strong Regionally restricted Figure euxassay_017942_07

Results: euxassay_017942_08 (embryonic day 14.5)
Structure Level Pattern Image images
TS23: olfactory epithelium Weak Regionally restricted Figure euxassay_017942_08
TS23: vomeronasal organ Weak Regionally restricted Figure euxassay_017942_08
TS23: lung Weak Regionally restricted Figure euxassay_017942_08
TS23: pericardium Moderate Spotted Figure euxassay_017942_08
TS23: spinal cord ventral grey horn Strong Single cells Figure euxassay_017942_08
TS23: spinal cord ventricular layer Strong Single cells Figure euxassay_017942_08
TS23: medulla oblongata basal plate ventricular layer Strong Regionally restricted Figure euxassay_017942_08
TS23: rest of cerebellum ventricular layer Weak Regionally restricted Figure euxassay_017942_08
TS23: rest of cerebellum marginal layer Strong Regionally restricted Figure euxassay_017942_08
TS23: pons ventricular layer Weak Regionally restricted Figure euxassay_017942_08
TS23: telencephalon ventricular layer Strong Regionally restricted Figure euxassay_017942_08
TS23: olfactory cortex ventricular layer Strong Regionally restricted Figure euxassay_017942_08
TS23: diencephalon lateral wall mantle layer Strong Regionally restricted Figure euxassay_017942_08

Results: euxassay_017942_09 (embryonic day 14.5)
Structure Level Pattern Image images
TS23: olfactory epithelium Moderate Spotted Figure euxassay_017942_09
TS23: vomeronasal organ Weak Regionally restricted Figure euxassay_017942_09
TS23: lung Weak Regionally restricted Figure euxassay_017942_09
TS23: pericardium Moderate Spotted Figure euxassay_017942_09
TS23: pituitary gland Moderate Regionally restricted Figure euxassay_017942_09
TS23: spinal cord ventral grey horn Strong Single cells Figure euxassay_017942_09
TS23: spinal cord intermediate grey horn Strong Single cells Figure euxassay_017942_09
TS23: spinal cord ventricular layer Strong Single cells Figure euxassay_017942_09
TS23: medulla oblongata basal plate ventricular layer Strong Regionally restricted Figure euxassay_017942_09
TS23: pons ventricular layer Moderate Regionally restricted Figure euxassay_017942_09
TS23: rest of cerebellum ventricular layer Moderate Regionally restricted Figure euxassay_017942_09
TS23: rest of cerebellum mantle layer Strong Regionally restricted Figure euxassay_017942_09
TS23: pons mantle layer Moderate Regionally restricted Figure euxassay_017942_09
TS23: telencephalon ventricular layer Strong Regionally restricted Figure euxassay_017942_09
TS23: telencephalon mantle layer Strong Regionally restricted Figure euxassay_017942_09
TS23: hypothalamus ventricular layer Strong Regionally restricted Figure euxassay_017942_09
TS23: diencephalon lateral wall mantle layer Strong Regionally restricted Figure euxassay_017942_09

Results: euxassay_017942_10 (embryonic day 14.5)
Structure Level Pattern Image images
TS23: olfactory epithelium Moderate Spotted Figure euxassay_017942_10
TS23: pericardium Moderate Spotted Figure euxassay_017942_10
TS23: pituitary gland Moderate Regionally restricted Figure euxassay_017942_10
TS23: spinal cord ventricular layer Strong Single cells Figure euxassay_017942_10
TS23: spinal cord intermediate grey horn Strong Single cells Figure euxassay_017942_10
TS23: spinal cord ventral grey horn Strong Single cells Figure euxassay_017942_10
TS23: medulla oblongata basal plate mantle layer Strong Regionally restricted Figure euxassay_017942_10
TS23: medulla oblongata basal plate ventricular layer Strong Regionally restricted Figure euxassay_017942_10
TS23: pons ventricular layer Strong Regionally restricted Figure euxassay_017942_10
TS23: rest of cerebellum marginal layer Strong Regionally restricted Figure euxassay_017942_10
TS23: midbrain mantle layer Strong Regionally restricted Figure euxassay_017942_10
TS23: telencephalon ventricular layer Strong Regionally restricted Figure euxassay_017942_10
TS23: telencephalon mantle layer Strong Regionally restricted Figure euxassay_017942_10
TS23: hypothalamus ventricular layer Strong Regionally restricted Figure euxassay_017942_10
TS23: diencephalon lateral wall mantle layer Strong Regionally restricted Figure euxassay_017942_10

Results: euxassay_017942_11 (embryonic day 14.5)
Structure Level Pattern Image images
TS23: vomeronasal organ Moderate Spotted Figure euxassay_017942_11
TS23: olfactory epithelium Moderate Spotted Figure euxassay_017942_11
TS23: pericardium Moderate Spotted Figure euxassay_017942_11
TS23: pituitary gland Moderate Regionally restricted Figure euxassay_017942_11
TS23: pancreas Strong Regionally restricted Figure euxassay_017942_11
TS23: spinal cord ventral grey horn Strong Single cells Figure euxassay_017942_11
TS23: spinal cord ventricular layer Strong Single cells Figure euxassay_017942_11
TS23: spinal cord intermediate grey horn Strong Single cells Figure euxassay_017942_11
TS23: medulla oblongata basal plate ventricular layer Strong Regionally restricted Figure euxassay_017942_11
TS23: medulla oblongata basal plate mantle layer Strong Regionally restricted Figure euxassay_017942_11
TS23: rest of cerebellum marginal layer Strong Regionally restricted Figure euxassay_017942_11
TS23: pons ventricular layer Strong Regionally restricted Figure euxassay_017942_11
TS23: midbrain mantle layer Strong Regionally restricted Figure euxassay_017942_11
TS23: diencephalon lateral wall ventricular layer Strong Regionally restricted Figure euxassay_017942_11
TS23: hypothalamus ventricular layer Strong Regionally restricted Figure euxassay_017942_11
TS23: diencephalon lateral wall mantle layer Strong Regionally restricted Figure euxassay_017942_11

Results: euxassay_017942_12 (embryonic day 14.5)
Structure Level Pattern Image images
TS23: olfactory epithelium Moderate Spotted Figure euxassay_017942_12
TS23: vomeronasal organ Moderate Spotted Figure euxassay_017942_12
TS23: lung Weak Regionally restricted Figure euxassay_017942_12
TS23: pericardium Moderate Spotted Figure euxassay_017942_12
TS23: pituitary gland Weak Regionally restricted Figure euxassay_017942_12
TS23: pancreas Strong Regionally restricted Figure euxassay_017942_12
TS23: spinal cord ventricular layer Strong Single cells Figure euxassay_017942_12
TS23: spinal cord ventral grey horn Strong Single cells Figure euxassay_017942_12
TS23: spinal cord intermediate grey horn Strong Single cells Figure euxassay_017942_12
TS23: medulla oblongata basal plate mantle layer Strong Regionally restricted Figure euxassay_017942_12
TS23: medulla oblongata basal plate ventricular layer Strong Regionally restricted Figure euxassay_017942_12
TS23: pons ventricular layer Strong Regionally restricted Figure euxassay_017942_12
TS23: rest of cerebellum marginal layer Strong Regionally restricted Figure euxassay_017942_12
TS23: midbrain mantle layer Strong Regionally restricted Figure euxassay_017942_12
TS23: telencephalon ventricular layer Strong Regionally restricted Figure euxassay_017942_12
TS23: olfactory cortex ventricular layer Strong Regionally restricted Figure euxassay_017942_12
TS23: telencephalon mantle layer Strong Regionally restricted Figure euxassay_017942_12
TS23: diencephalon lateral wall ventricular layer Strong Regionally restricted Figure euxassay_017942_12
TS23: diencephalon lateral wall mantle layer Strong Regionally restricted Figure euxassay_017942_12

Results: euxassay_017942_13 (embryonic day 14.5)
Structure Level Pattern Image images
TS23: olfactory epithelium Weak Regionally restricted Figure euxassay_017942_13
TS23: lung Weak Regionally restricted Figure euxassay_017942_13
TS23: pericardium Moderate Spotted Figure euxassay_017942_13
TS23: pituitary gland Weak Regionally restricted Figure euxassay_017942_13
TS23: spinal cord ventral grey horn Strong Single cells Figure euxassay_017942_13
TS23: spinal cord ventricular layer Strong Single cells Figure euxassay_017942_13
TS23: spinal cord intermediate grey horn Strong Single cells Figure euxassay_017942_13
TS23: medulla oblongata basal plate ventricular layer Strong Regionally restricted Figure euxassay_017942_13
TS23: pons ventricular layer Moderate Regionally restricted Figure euxassay_017942_13
TS23: rest of cerebellum marginal layer Moderate Regionally restricted Figure euxassay_017942_13
TS23: telencephalon ventricular layer Strong Regionally restricted Figure euxassay_017942_13
TS23: olfactory cortex ventricular layer Strong Regionally restricted Figure euxassay_017942_13
TS23: telencephalon mantle layer Strong Regionally restricted Figure euxassay_017942_13
TS23: diencephalon lateral wall ventricular layer Strong Regionally restricted Figure euxassay_017942_13

Results: euxassay_017942_14 (embryonic day 14.5)
Structure Level Pattern Image images
TS23: olfactory epithelium Moderate Regionally restricted Figure euxassay_017942_14
TS23: lung Moderate Regionally restricted Figure euxassay_017942_14
TS23: pericardium Moderate Spotted Figure euxassay_017942_14
TS23: pituitary gland Weak Regionally restricted Figure euxassay_017942_14
TS23: spinal cord ventral grey horn Strong Single cells Figure euxassay_017942_14
TS23: spinal cord ventricular layer Strong Single cells Figure euxassay_017942_14
TS23: spinal cord intermediate grey horn Strong Single cells Figure euxassay_017942_14
TS23: medulla oblongata basal plate ventricular layer Strong Regionally restricted Figure euxassay_017942_14
TS23: telencephalon ventricular layer Strong Regionally restricted Figure euxassay_017942_14
TS23: telencephalon mantle layer Strong Regionally restricted Figure euxassay_017942_14
TS23: diencephalon lateral wall mantle layer Strong Regionally restricted Figure euxassay_017942_14
TS23: diencephalon lateral wall ventricular layer Strong Regionally restricted Figure euxassay_017942_14
TS23: hypothalamus ventricular layer Strong Regionally restricted Figure euxassay_017942_14

Results: euxassay_017942_15 (embryonic day 14.5)
Structure Level Pattern Image images
TS23: olfactory epithelium Strong Regionally restricted Figure euxassay_017942_15
TS23: lung Weak Regionally restricted Figure euxassay_017942_15
TS23: pericardium Moderate Spotted Figure euxassay_017942_15
TS23: pituitary gland Weak Regionally restricted Figure euxassay_017942_15
TS23: spinal cord ventral grey horn Strong Single cells Figure euxassay_017942_15
TS23: medulla oblongata basal plate ventricular layer Strong Regionally restricted Figure euxassay_017942_15
TS23: medulla oblongata basal plate mantle layer Strong Regionally restricted Figure euxassay_017942_15
TS23: pons ventricular layer Strong Regionally restricted Figure euxassay_017942_15
TS23: rest of cerebellum marginal layer Strong Regionally restricted Figure euxassay_017942_15
TS23: telencephalon ventricular layer Strong Regionally restricted Figure euxassay_017942_15
TS23: telencephalon mantle layer Strong Regionally restricted Figure euxassay_017942_15
TS23: diencephalon lateral wall mantle layer Strong Regionally restricted Figure euxassay_017942_15

Results: euxassay_017942_16 (embryonic day 14.5)
Structure Level Pattern Image images
TS23: olfactory epithelium Strong Regionally restricted Figure euxassay_017942_16
TS23: lung Weak Regionally restricted Figure euxassay_017942_16
TS23: pericardium Moderate Spotted Figure euxassay_017942_16
TS23: spinal cord ventral grey horn Strong Single cells Figure euxassay_017942_16
TS23: medulla oblongata basal plate ventricular layer Strong Regionally restricted Figure euxassay_017942_16
TS23: medulla oblongata basal plate mantle layer Strong Regionally restricted Figure euxassay_017942_16
TS23: pons ventricular layer Strong Regionally restricted Figure euxassay_017942_16
TS23: rest of cerebellum marginal layer Strong Regionally restricted Figure euxassay_017942_16
TS23: midbrain mantle layer Strong Regionally restricted Figure euxassay_017942_16
TS23: telencephalon ventricular layer Strong Regionally restricted Figure euxassay_017942_16
TS23: telencephalon mantle layer Strong Regionally restricted Figure euxassay_017942_16
TS23: diencephalon lateral wall mantle layer Strong Regionally restricted Figure euxassay_017942_16

Results: euxassay_017942_17 (embryonic day 14.5)
Structure Level Pattern Image images
TS23: lung Weak Regionally restricted Figure euxassay_017942_17
TS23: medulla oblongata basal plate ventricular layer Strong Regionally restricted Figure euxassay_017942_17
TS23: rest of cerebellum marginal layer Strong Regionally restricted Figure euxassay_017942_17
TS23: pons ventricular layer Strong Regionally restricted Figure euxassay_017942_17
TS23: midbrain mantle layer Strong Regionally restricted Figure euxassay_017942_17
TS23: telencephalon ventricular layer Strong Regionally restricted Figure euxassay_017942_17
TS23: telencephalon mantle layer Strong Regionally restricted Figure euxassay_017942_17
TS23: diencephalon lateral wall mantle layer Strong Regionally restricted Figure euxassay_017942_17
TS23: hypothalamus mantle layer Strong Regionally restricted Figure euxassay_017942_17

Results: euxassay_017942_18 (embryonic day 14.5)
Structure Level Pattern Image images
TS23: lung Weak Regionally restricted Figure euxassay_017942_18
TS23: medulla oblongata basal plate ventricular layer Strong Regionally restricted Figure euxassay_017942_18
TS23: rest of cerebellum marginal layer Strong Regionally restricted Figure euxassay_017942_18
TS23: pons ventricular layer Strong Regionally restricted Figure euxassay_017942_18
TS23: midbrain mantle layer Strong Regionally restricted Figure euxassay_017942_18
TS23: telencephalon ventricular layer Strong Regionally restricted Figure euxassay_017942_18
TS23: telencephalon mantle layer Strong Regionally restricted Figure euxassay_017942_18
TS23: diencephalon lateral wall mantle layer Strong Regionally restricted Figure euxassay_017942_18

Results: euxassay_017942_19 (embryonic day 14.5)
Structure Level Pattern Image images
TS23: rest of cerebellum marginal layer Strong Regionally restricted Figure euxassay_017942_19
TS23: pons ventricular layer Moderate Regionally restricted Figure euxassay_017942_19
TS23: telencephalon ventricular layer Strong Regionally restricted Figure euxassay_017942_19
TS23: telencephalon mantle layer Strong Regionally restricted Figure euxassay_017942_19

Results: euxassay_017942_20 (embryonic day 14.5)
Structure Level Pattern Image images
TS23: cornea epithelium Strong Regionally restricted Figure euxassay_017942_20
TS23: neural retina Strong Regionally restricted Figure euxassay_017942_20
TS23: rest of cerebellum marginal layer Strong Regionally restricted Figure euxassay_017942_20
TS23: telencephalon ventricular layer Strong Regionally restricted Figure euxassay_017942_20
TS23: telencephalon mantle layer Strong Regionally restricted Figure euxassay_017942_20

Results: euxassay_017942_21 (embryonic day 14.5)
Structure Level Pattern Image images
TS23: neural retina Strong Regionally restricted Figure euxassay_017942_21
TS23: cornea epithelium Strong Regionally restricted Figure euxassay_017942_21
TS23: rest of cerebellum ventricular layer Strong Regionally restricted Figure euxassay_017942_21
TS23: rest of cerebellum marginal layer Strong Regionally restricted Figure euxassay_017942_21
TS23: telencephalon ventricular layer Strong Regionally restricted Figure euxassay_017942_21
TS23: telencephalon mantle layer Strong Regionally restricted Figure euxassay_017942_21

Results: euxassay_017942_22 (embryonic day 14.5)
Structure Level Pattern Image images
TS23: neural retina Strong Regionally restricted Figure euxassay_017942_22
TS23: cornea epithelium Strong Regionally restricted Figure euxassay_017942_22
TS23: rest of cerebellum ventricular layer Strong Regionally restricted Figure euxassay_017942_22
TS23: rest of cerebellum marginal layer Strong Regionally restricted Figure euxassay_017942_22
TS23: telencephalon ventricular layer Strong Regionally restricted Figure euxassay_017942_22
TS23: telencephalon mantle layer Strong Regionally restricted Figure euxassay_017942_22

Results: euxassay_017942_23 (embryonic day 14.5)
Structure Level Pattern Image images
TS23: neural retina Strong Regionally restricted Figure euxassay_017942_23
TS23: cornea epithelium Strong Regionally restricted Figure euxassay_017942_23
TS23: rest of cerebellum ventricular layer Strong Regionally restricted Figure euxassay_017942_23
TS23: rest of cerebellum marginal layer Strong Regionally restricted Figure euxassay_017942_23
TS23: telencephalon ventricular layer Strong Regionally restricted Figure euxassay_017942_23

Results: euxassay_017942_24 (embryonic day 14.5)
Structure Level Pattern Image images
TS23: neural retina Strong Regionally restricted Figure euxassay_017942_24
TS23: cornea epithelium Strong Regionally restricted Figure euxassay_017942_24
TS23: telencephalon ventricular layer Strong Regionally restricted Figure euxassay_017942_24

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last database update
05/08/2013
MGI 5.13
The Jackson Laboratory