About   Help   FAQ
Chuk Gene Detail
 Symbol
Name
ID
Chuk
conserved helix-loop-helix ubiquitous kinase
MGI:99484


Nomenclature History
Synonyms Chuk1, IkappaB kinase alpha, IKK 1, IKK alpha, IKK-1, IKK-alpha, IKK[a], IKK1, IKKalpha
Genetic Map
Chromosome 19
45.0 cM
Detailed Genetic Map ± 1 cM
 
Mapping data( 8)

Sequence Map
Chr19:44147825-44181970 bp, - strand
(From VEGA annotation of NCBI Build 37)
VEGA ContigView | Ensembl ContigView | UCSC Browser | NCBI Map Viewer

Mouse Genome Browser
Mammalian
homology
human; chimpanzee; cattle; dog, domestic; rat    (Mammalian Orthology)
Comparative Map (Mouse/Human Chuk ± 2 cM)
Protein SuperFamily: inhibitor of nuclear factor kappa-B kinase complex alpha-like subunit
TreeFam: TF324269
Sequences
Representative Sequences Length Strain/Species Flank
genomic OTTMUSG00000029724 VEGA Gene Model | MGI Sequence Detail 34146 C57BL/6J ± Kb
transcript NM_007700 RefSeq | MGI Sequence Detail 3500 C57BL/6
polypeptide Q60680 UniProt | EBI | MGI Sequence Detail 745 Not Applicable
For the selected sequences
All sequences(39)
Alleles
and
phenotypes
All alleles(28) : Targeted, knock-out(3) Targeted, other(7) Gene trapped(18)
Homozygotes for targeted null mutations die neonataly and exhibit thickened, taut, adhesive skin that prevents appendages from protruding from the trunk, absence of whiskers, skeletal abnormalities, and closed esophagus.
Polymorphisms All PCR and RFLP(2) : PCR(1) RFLP(1) SNPs within 2kb(160 from dbSNP Build 128)  
Gene Ontology
(GO)
classifications
All GO classifications: (26 annotations)
Process I-kappaB phosphorylation, lactation...
Component cytoplasm, nucleus...
Function ATP binding, IkappaB kinase activity...
External Resources: FuncBase
Expression Literature Summary: (15 records)
Data Summary: Assays (2)    Results (50)    Tissues (48)    Images (1)
Theiler Stages: 10,18,23,25,28
  Assay Type Assays   Results
      RT-PCR 1   46
      Northern blot 1   4
cDNA source data(19)
External Resources: Allen Brain Atlas  GEO  ArrayExpress 
Molecular
reagents
All nucleic(24) cDNA(22) Primer pair(2)
Microarray probesets(3)
Other database
links
EC 2.7.11.10
Ensembl Gene Model ENSMUSG00000025199
DoTS DT.101285624, DT.103560182, DT.533455, DT.94158624, DT.97346809
Consensus CDS Project CCDS29843.1
DFCI TC1575438, TC1585610
NIA Mouse Gene Index U039070
Entrez Gene 12675
VEGA Gene Model OTTMUSG00000029724
International Mouse Knockout Project Status Chuk
Protein
domains
InterPro ID Description
IPR000719 Protein kinase, catalytic domain
IPR008271 Serine/threonine-protein kinase, active site
IPR011009 Protein kinase-like domain
IPR017441 Protein kinase, ATP binding site
IPR017442 Serine/threonine-protein kinase-like domain
Graphical View of Protein Domain Structure
References
(Earliest) J:26193 Mock BA et al., "CHUK, a conserved helix-loop-helix ubiquitous kinase, maps to human chromosome 10 and mouse chromosome 19." Genomics 1995 May 20;27(2):348-51
(Latest) J:155777 Pawlowski TL et al., "Candidate Agtr2 influenced genes and pathways identified by expression profiling in the developing brain of Agtr2(-/y) mice." Genomics 2009 Sep;94(3):188-95
All references(85)
Other
accession IDs
MGD-MRK-16258, MGI:2147493

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
Warranty Disclaimer & Copyright Notice
Send questions and comments to User Support.
last database update
02/06/2010
MGI_4.32
Web browser compatibility
The Jackson Laboratory