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Tpi1 Gene Detail
 Symbol
Name
ID
Tpi1
triosephosphate isomerase 1
MGI:98797


Nomenclature History
Synonyms Tpi-1
Genetic Map
Chromosome 6
60.2 cM
Detailed Genetic Map ± 1 cM
 
Mapping data( 33)

Sequence Map
Chr6:124760610-124764314 bp, - strand
(From VEGA annotation of NCBI Build 37)
VEGA ContigView | Ensembl ContigView | UCSC Browser | NCBI Map Viewer

Mouse Genome Browser
Mammalian
homology
human; cat, domestic; chimpanzee; cattle; dog, domestic; lemur, mouse; rat; sheep    (Mammalian Orthology)
Comparative Map (Mouse/Human Tpi1 ± 2 cM)
Protein SuperFamily: triose-phosphate isomerase
TreeFam: TF300829
Sequences
Representative Sequences Length Strain/Species Flank
genomic OTTMUSG00000017534 VEGA Gene Model | MGI Sequence Detail 3705 C57BL/6J ± Kb
transcript NM_009415 RefSeq | MGI Sequence Detail 1601 C57BL/6
polypeptide P17751 UniProt | EBI | MGI Sequence Detail 249 Not Applicable
For the selected sequences
All sequences(46)
Alleles
and
phenotypes
All alleles(7) : Gene trapped(2) Chemically induced(5)
Homozygous null mutants die at postimplantation stage. Heterozygotes are normal, but with 50% of normal enzyme activity. Mice heterozygous or homozygous for a hyperactivity allele have 140 and 190% enzyme activity, respectively, but are otherwise normal.
Polymorphisms RFLP(7) SNPs within 2kb(16 from dbSNP Build 128)  
Gene Ontology
(GO)
classifications
All GO classifications(15)
Process embryonic development, fatty acid biosynthetic process...
Function catalytic activity, isomerase activity...
This is a GO Consortium Reference Genome Project gene.
External Resources: MouseFunc
Expression Literature Summary: (5 records)
Data Summary: Assays (4)    Results (150)    Tissues (112)    Images (23)
Theiler Stages: 15,17,22,28
  Assay Type Assays   Results
      RT-PCR 1   2
      RNA in situ 2   140
      Northern blot 1   8
cDNA source data(21)
External Resources: Allen Brain Atlas  GEO 
Molecular
reagents
All nucleic(31) Genomic(4) cDNA(23) Primer pair(2) Other(2)
Microarray probesets(3)
Pathways
glycolysis III
glycolysis I
glycolysis II
Other database
links
EC 5.3.1.1
Ensembl Gene Model ENSMUSG00000023456
DoTS DT.101361611, DT.101361797, DT.91430834, DT.94336363, DT.97412889
DFCI TC1573704, TC1617989, TC1672720
NIA Mouse Gene Index U027850, U076225
Entrez Gene 21991
VEGA Gene Model OTTMUSG00000017534
International Mouse Knockout Project Status Tpi1
Protein
domains
InterPro ID Description
IPR000652 Triosephosphate isomerase
IPR013785 Aldolase-type TIM barrel
Graphical View of Protein Domain Structure
References
(Earliest) J:5946 Kozak CA et al., "Assignment of the genes for thymidine kinase and galactokinase to Mus musculus chromosome 11 and the preferential segregation of this chromosome in Chinese hamster/mouse somatic cell hybrids." Somatic Cell Genet 1977 Mar;3(2):121-33
(Latest) J:125993 Cankaya M et al., "An analysis of expression patterns of genes encoding proteins with catalytic activities." BMC Genomics 2007;8():232
All references(40)
Other
accession IDs
MGD-MRK-15179, MGD-MRK-15180, MGI:2141384

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
11/20/2009
MGI_4.31
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The Jackson Laboratory