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Pparg Gene Detail
 Symbol
Name
ID
Pparg
peroxisome proliferator activated receptor gamma
MGI:97747


Nomenclature History
Synonyms Nr1c3, PPAR-gamma, Ppar-gamma2, PPARgamma, PPARgamma2
Genetic Map
Chromosome 6
52.7 cM, cytoband E3-F1
Detailed Genetic Map ± 1 cM
 
Mapping data( 19)

Sequence Map
Chr6:115372091-115440419 bp, + strand
(From NCBI annotation of NCBI Build 37)
Ensembl ContigView | UCSC Browser | NCBI Map Viewer

Mouse Genome Browser
Mammalian
homology
human; chimpanzee; cattle; dog, domestic; rat    (Mammalian Orthology)
Comparative Map (Mouse/Human Pparg ± 2 cM)
Protein SuperFamily: peroxisome proliferator activated receptor (PPAR)
TreeFam: TF316304
Sequences
Representative Sequences Length Strain/Species Flank
genomic 19016 NCBI Gene Model | MGI Sequence Detail 68329 C57BL/6J ± Kb
transcript NM_001127330 RefSeq | MGI Sequence Detail 1857 C57BL/6
polypeptide P37238 UniProt | EBI | MGI Sequence Detail 505 Not Applicable
For the selected sequences
All sequences(41)
Alleles
and
phenotypes
All alleles(25) : Targeted, knock-out(7) Targeted, other(18)
Homozygotes for targeted null mutations exhibit lethality due to placental defects. Heterozygotes show greater B cell proliferation, enhanced leptin secretion, and resistance to diet-induced adipocyte hypertrophy and insulin resistance.
Associated Human Diseases (3)   Alleles Annotated to Human Diseases (4)   Phenotype Images (6)  
Polymorphisms RFLP(2) SNPs within 2kb(308 from dbSNP Build 128)  
Gene Ontology
(GO)
classifications
All GO classifications(40)
Process brown fat cell differentiation, cell fate commitment...
Component cytosol, nucleus...
Function arachidonic acid binding, chromatin binding...
External Resources: MouseFunc
Expression Literature Summary: (26 records)
Data Summary: Assays (7)    Results (138)    Tissues (110)    Images (13)
Theiler Stages: 15,17,19,20,21,22,23,24,25,26,28
  Assay Type Assays   Results
      RT-PCR 2   14
      RNA in situ 1   93
      Northern blot 4   31
cDNA source data(31)
External Resources: Allen Brain Atlas  GEO 
Molecular
reagents
All nucleic(44) Genomic(7) cDNA(32) Primer pair(3) Other(2)
Microarray probesets(2)
Other database
links
Ensembl Gene Model ENSMUSG00000000440
DoTS DT.527551, DT.529203, DT.91379717
UniGene 3020
DFCI TC1584275
NIA Mouse Gene Index U007293
Entrez Gene 19016
International Mouse Knockout Project Status Pparg
Protein
domains
InterPro ID Description
IPR000536 Nuclear hormone receptor, ligand-binding, core
IPR001628 Zinc finger, nuclear hormone receptor-type
IPR001723 Steroid hormone receptor
IPR003074 Peroxisome proliferator-activated receptor
IPR003077 Peroxisome proliferator-activated receptor, gamma
IPR008946 Nuclear hormone receptor, ligand-binding
IPR013088 Zinc finger, NHR/GATA-type
Graphical View of Protein Domain Structure
References
(Earliest) J:15412 Chen F et al., "Identification of two mPPAR related receptors and evidence for the existence of five subfamily members." Biochem Biophys Res Commun 1993 Oct 29;196(2):671-7
(Latest) J:153891 Tsai YS et al., "Decreased PPAR gamma expression compromises perigonadal-specific fat deposition and insulin sensitivity." Mol Endocrinol 2009 Nov;23(11):1787-98
All references(236)
Other
accession IDs
MGD-MRK-13589

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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Funding Information
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last database update
11/20/2009
MGI_4.31
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