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Pkm2 Gene Detail
 Symbol
Name
ID
Pkm2
pyruvate kinase, muscle
MGI:97591


Nomenclature History
Synonyms Pk-2, Pk-3, Pk3
Genetic Map
Chromosome 9
52.0 cM
Detailed Genetic Map ± 1 cM
 
Mapping data( 14)

Sequence Map
Chr9:59504415-59527182 bp, + strand
(From NCBI annotation of NCBI Build 37)
Ensembl ContigView | UCSC Browser | NCBI Map Viewer

Mouse Genome Browser
Mammalian
homology
human; cat, domestic; chimpanzee; cattle; dog, domestic; gorilla; pig, domestic; rabbit, European; rat; sheep    (Mammalian Orthology)
Comparative Map (Mouse/Human Pkm2 ± 2 cM)
Protein SuperFamily: pyruvate kinase
TreeFam: TF300390
Sequences
Representative Sequences Length Strain/Species Flank
genomic 18746 NCBI Gene Model | MGI Sequence Detail 22768 C57BL/6J ± Kb
transcript NM_011099 RefSeq | MGI Sequence Detail 2212 FVB/N
polypeptide P52480 UniProt | EBI | MGI Sequence Detail 531 Not Applicable
For the selected sequences
All sequences(69)
Alleles
and
phenotypes
All alleles(127) : Gene trapped(127)
Co-dominant electrophoretic variants are: C57BL and most inbreds have slow anodal bands (a allele); IS/Cam and Peru have faster migrating bands (b allele). A third mutant activity allele arose in C57BL and is prenatal lethal in homozygotes; heterozygotes have about 50% activity in kidney and heart.
Polymorphisms SNPs within 2kb(130 from dbSNP Build 128)  
Gene Ontology
(GO)
classifications
All GO classifications(16)
Process glycolysis
Component cytoplasm, flagellum...
Function ATP binding, catalytic activity...
External Resources: MouseFunc
Expression Literature Summary: (7 records)
Data Summary: Assays (9)    Results (169)    Tissues (108)    Images (21)
Theiler Stages: 22,24,28
  Assay Type Assays   Results
      RT-PCR 3   18
      RNA in situ 4   129
      Northern blot 2   22
cDNA source data(30)
External Resources: Allen Brain Atlas  GENSAT  GEO 
Molecular
reagents
All nucleic(37) cDNA(31) Primer pair(6)
Microarray probesets(2)
Pathways
glycolysis III
glycolysis I
glycolysis II
Other database
links
EC 2.7.1.40
Ensembl Gene Model ENSMUSG00000032294
DoTS DT.101225700, DT.101242555, DT.102552948, DT.110615414, DT.87073803, DT.91431037, DT.97353754, DT.97391543, DT.97391559, DT.97391564, DT.99872554
DFCI TC1573623, TC1755768
NIA Mouse Gene Index U010583, U096926
Entrez Gene 18746
International Mouse Knockout Project Status Pkm2
Protein
domains
InterPro ID Description
IPR001697 Pyruvate kinase
IPR015793 Pyruvate kinase, barrel
IPR015794 Pyruvate kinase, alpha/beta
IPR015813 Pyruvate/Phosphoenolpyruvate kinase, catalytic core
IPR018209 Pyruvate kinase, active site
Graphical View of Protein Domain Structure
References
(Earliest) J:5994 Lalley PA et al., "Conservation of autosomal gene synteny groups in mouse and man." Nature 1978 Jul 13;274(5667):160-3
(Latest) J:149737 Sansom SN et al., "The level of the transcription factor Pax6 is essential for controlling the balance between neural stem cell self-renewal and neurogenesis." PLoS Genet 2009 Jun;5(6):e1000511
All references(35)
Other
accession IDs
MGD-MRK-13319, MGD-MRK-13320, MGD-MRK-13322, MGI:2143183, MGI:2143184, MGI:2144733

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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Funding Information
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last database update
11/20/2009
MGI_4.31
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The Jackson Laboratory