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Pik3r1 Gene Detail
 Symbol
Name
ID
Pik3r1
phosphatidylinositol 3-kinase, regulatory subunit, polypeptide 1 (p85 alpha)
MGI:97583


Nomenclature History
Synonyms p50alpha, p55alpha, p85alpha, PI3K
Genetic Map
Chromosome 13
50.0 cM
Detailed Genetic Map ± 1 cM
 
Mapping data( 7)

Sequence Map
Chr13:102450716-102538172 bp, - strand
(From NCBI annotation of NCBI Build 37)
Ensembl ContigView | UCSC Browser | NCBI Map Viewer

Mouse Genome Browser
Mammalian
homology
human; chimpanzee; cattle; dog, domestic; rat    (Mammalian Orthology)
Comparative Map (Mouse/Human Pik3r1 ± 2 cM)
Protein SuperFamily: phosphatidylinositol 3-kinase, regulatory subunit, p85 type
TreeFam: TF102033
Sequences
Representative Sequences Length Strain/Species Flank
genomic 18708 NCBI Gene Model | MGI Sequence Detail 87457 C57BL/6J ± Kb
transcript NM_001077495 RefSeq | MGI Sequence Detail 6915 C57BL/6
polypeptide P26450 UniProt | EBI | MGI Sequence Detail 724 Not Applicable
For the selected sequences
All sequences(46)
Alleles
and
phenotypes
All alleles(18) : Targeted, knock-out(3) Targeted, other(1) Gene trapped(14)
Homozygotes for a targeted null mutation exhibit perinatal lethality associated with hepatic necrosis, chylous ascites, enlarged muscle fibers, calcification of cardiac tissue, and hypoglycemia. Mutants lacking only the major isoform are immunodeficient.
Associated Human Diseases (1)   Alleles Annotated to Human Diseases (2)  
Polymorphisms All PCR and RFLP(2) : PCR(1) RFLP(1) SNPs within 2kb(336 from dbSNP Build 128)  
Gene Ontology
(GO)
classifications
All GO classifications: (21 annotations)
Process B cell differentiation, negative regulation of apoptosis...
Component cytoplasm, cytosol...
Function 1-phosphatidylinositol-3-kinase activity, insulin receptor substrate binding...
External Resources: FuncBase
Expression Literature Summary: (13 records)
Data Summary: Assays (3)    Results (46)    Tissues (31)    Images (1)
Theiler Stages: 21,22,23,24,25,26,28
  Assay Type Assays   Results
      Western blot 1   9
      RNA in situ 1   12
      Northern blot 1   25
cDNA source data(104)
External Resources: Allen Brain Atlas  GENSAT  GEO  ArrayExpress 
Molecular
reagents
All nucleic(116) Genomic(9) cDNA(106) Primer pair(1) Antibodies(1)
Microarray probesets(4)
Other database
links
Ensembl Gene Model ENSMUSG00000041417
DoTS DT.101164583, DT.101356000, DT.110975228, DT.487883, DT.87034068
Consensus CDS Project CCDS26740.1, CCDS36769.1
UniGene 259333
DFCI TC1581848, TC1582013, TC1642133, TC1666508, TC1692216, TC1731222
NIA Mouse Gene Index U035123
Entrez Gene 18708
International Mouse Knockout Project Status Pik3r1
Protein
domains
InterPro ID Description
IPR000198 RhoGAP
IPR000980 SH2 motif
IPR001452 Src homology-3 domain
IPR001720 PI3 kinase, P85 regulatory subunit
IPR008936 Rho GTPase activation protein
IPR011511 Variant SH3
Graphical View of Protein Domain Structure
References
(Earliest) J:17845 Escobedo JA et al., "cDNA cloning of a novel 85 kd protein that has SH2 domains and regulates binding of PI3-kinase to the PDGF beta-receptor." Cell 1991 Apr 5;65(1):75-82
(Latest) J:152818 Melnick M et al., "Salivary gland branching morphogenesis: a quantitative systems analysis of the Eda/Edar/NFkappaB paradigm." BMC Dev Biol 2009;9():32
All references(119)
Other
accession IDs
MGD-MRK-13305, MGI:2145159

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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Funding Information
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last database update
02/06/2010
MGI_4.32
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