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Pgap1 Gene Detail
 Symbol
Name
ID
Pgap1
post-GPI attachment to proteins 1
MGI:2443342


Nomenclature History
Synonyms 5033403E17Rik, 9030223K07Rik, D230012E17Rik, oto, PGAP1
Genetic Map
Chromosome 1
Syntenic
 
Mapping data( 2)
Sequence Map
Chr1:54537550-54614526 bp, - strand
(From NCBI annotation of NCBI Build 37)
Ensembl ContigView | UCSC Browser | NCBI Map Viewer

Mouse Genome Browser
Mammalian
homology
human; chimpanzee; cattle; dog, domestic; rat    (Mammalian Orthology)
TreeFam: TF314565
Sequences
Representative Sequences Length Strain/Species Flank
genomic 241062 NCBI Gene Model | MGI Sequence Detail 76977 C57BL/6J ± Kb
transcript NM_001163314 RefSeq | MGI Sequence Detail 2871 -
polypeptide Q3UUQ7 UniProt | EBI | MGI Sequence Detail 922 Not Applicable
For the selected sequences
All sequences(35)
Alleles
and
phenotypes
All alleles(12) : Targeted, knock-out(1) Gene trapped(10) Radiation induced(1)
Mice homozygous for a radiation-induced mutation exhibit a variety of forebrain, eye, jaw, craniofacial, ear, and vertebra defects that are background sensitive.
Polymorphisms SNPs within 2kb(376 from dbSNP Build 128)   SNPs within 2kb including multiple locations(382)
Gene Ontology
(GO)
classifications
All GO classifications(20)
Process anterior/posterior axis specification, embryonic pattern specification...
Component endoplasmic reticulum, integral to membrane...
Function catalytic activity, hydrolase activity...
External Resources: MouseFunc
Expression Literature Summary: (1 records)
cDNA source data(53)
External Resources: Allen Brain Atlas  GEO 
Molecular
reagents
All nucleic(55) Genomic(2) cDNA(53)
Microarray probesets(2)
Other database
links
Ensembl Gene Model ENSMUSG00000070889, ENSMUSG00000073678
DoTS DT.101236777, DT.103576980, DT.55127596, DT.91364019, DT.94153255, DT.94239229
UniGene 253601
DFCI TC1590594, TC1618400, TC1621170, TC1648341
Entrez Gene 241062
International Mouse Knockout Project Status Pgap1
Protein
domains
InterPro ID Description
IPR008262 Lipase, serine active site
IPR012908 PGAP1-like
Graphical View of Protein Domain Structure
References
(Earliest) J:7938 Juriloff DM et al., "Genetic and developmental studies of a new mouse mutation that produces otocephaly." J Craniofac Genet Dev Biol 1985;5(2):121-45
(Latest) J:151594 Zoltewicz JS et al., "Wnt signaling is regulated by endoplasmic reticulum retention." PLoS One 2009;4(7):e6191
All references(10)
Other
accession IDs
MGD-MRK-13085, MGI:1923226, MGI:2444805, MGI:97449

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
11/20/2009
MGI_4.31
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The Jackson Laboratory