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Mgat1 Gene Detail
 Symbol
Name
ID
Mgat1
mannoside acetylglucosaminyltransferase 1
MGI:96973


Nomenclature History
Synonyms Mgat-1
Genetic Map
Chromosome 11
28.5 cM
Detailed Genetic Map ± 1 cM
 
Mapping data( 24)

Sequence Map
Chr11:49057748-49076532 bp, + strand
(From VEGA annotation of NCBI Build 37)
VEGA ContigView | Ensembl ContigView | UCSC Browser | NCBI Map Viewer

Mouse Genome Browser
Mammalian
homology
human; chimpanzee; cattle; dog, domestic; rat    (Mammalian Orthology)
Comparative Map (Mouse/Human Mgat1 ± 2 cM)
Protein SuperFamily: alpha-1,3-mannosyl-glycoprotein beta-1,2-N-acetylglucosaminyltransferase
TreeFam: TF320555
Sequences
Representative Sequences Length Strain/Species Flank
genomic OTTMUSG00000005541 VEGA Gene Model | MGI Sequence Detail 18785 C57BL/6J ± Kb
transcript NM_001110148 RefSeq | MGI Sequence Detail 3165 C57BL/6
polypeptide P27808 UniProt | EBI | MGI Sequence Detail 447 Not Applicable
For the selected sequences
All sequences(40)
Alleles
and
phenotypes
All alleles(8) : Targeted, knock-out(2) Targeted, other(1) Gene trapped(5)
Homozygotes for targeted null mutations develop a deficiency of complex N-glycans during embryogenesis, exhibit defects of neural tube formation, vascularization, and left-right body axis determination, and die by embryonic day 10.5.
Polymorphisms RFLP(3) SNPs within 2kb(42 from dbSNP Build 128)  
Gene Ontology
(GO)
classifications
All GO classifications: (9 annotations)
Process protein amino acid N-linked glycosylation
Component Golgi apparatus, Golgi membrane...
Function alpha-1,3-mannosylglycoprotein 2-beta-N-acetylglucosaminyltransferase activity, transferase activity...
External Resources: FuncBase
Expression Literature Summary: (3 records)
Data Summary: Assays (3)    Results (44)    Tissues (4)    Images (2)
Theiler Stages: 4,28
  Assay Type Assays   Results
      RT-PCR 2   40
      RNA in situ 1   4
cDNA source data(131)
External Resources: Allen Brain Atlas  GEO  ArrayExpress 
Molecular
reagents
All nucleic(140) Genomic(7) cDNA(132) Primer pair(1)
Microarray probesets(2)
Other database
links
EC 2.4.1.101
Ensembl Gene Model ENSMUSG00000020346
DoTS DT.101323686, DT.101386850, DT.534189, DT.94282283, DT.97360446, DT.99863187
Consensus CDS Project CCDS24602.1
UniGene 196933
DFCI TC1572576, TC1659675
NIA Mouse Gene Index U012522
Entrez Gene 17308
VEGA Gene Model OTTMUSG00000005541
International Mouse Knockout Project Status Mgat1
Protein
domains
InterPro ID Description
IPR004139 Glycosyl transferase, family 13
Graphical View of Protein Domain Structure
References
(Earliest) J:2958 Pownall S et al., "Molecular cloning and characterization of the mouse UDP-N-acetylglucosamine:alpha-3-D-mannoside beta-1,2-N-acetylglucosaminyltransferase I gene." Genomics 1992 Apr;12(4):699-704
(Latest) J:150225 Williams SA et al., "Oocyte-specific deletion of complex and hybrid N-glycans leads to defects in preovulatory follicle and cumulus mass development." Reproduction 2009 Feb;137(2):321-31
All references(31)
Other
accession IDs
MGD-MRK-12217, MGD-MRK-12218

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
02/06/2010
MGI_4.32
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The Jackson Laboratory