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Car2 Gene Detail
 Symbol
Name
ID
Car2
carbonic anhydrase 2
MGI:88269


Nomenclature History
Synonyms CA II, CAII, Car-2, Ltw-5, Lvtw-5
Genetic Map
Chromosome 3
10.5 cM
Detailed Genetic Map ± 1 cM
 
Mapping data( 42)

Sequence Map
Chr3:14886725-14900769 bp, + strand
(From NCBI annotation of NCBI Build 37)
Ensembl ContigView | UCSC Browser | NCBI Map Viewer

Mouse Genome Browser
Mammalian
homology
human; chimpanzee; cattle; dog, domestic; rat; sheep    (Mammalian Orthology)
Comparative Map (Mouse/Human Car2 ± 2 cM)
Protein SuperFamily: carbonate dehydratase
TreeFam: TF316425
Sequences
Representative Sequences Length Strain/Species Flank
genomic 12349 NCBI Gene Model | MGI Sequence Detail 14045 C57BL/6J ± Kb
transcript NM_009801 RefSeq | MGI Sequence Detail 1807 C57BL/6
polypeptide P00920 UniProt | EBI | MGI Sequence Detail 260 Not Applicable
For the selected sequences
All sequences(31)
Alleles
and
phenotypes
All alleles(2) : Targeted, knock-out(1) Chemically induced(1)
Homozygous mutant mice are growth retarded, display renal tubular acidosis, but mutants have not been recovered that display osteopetrosis as found in human CA-II deficiency.
Associated Human Diseases (1)   Alleles Annotated to Human Diseases (1)   Phenotype Images (1)  
Polymorphisms RFLP(3) SNPs within 2kb(156 from dbSNP Build 128)  
Gene Ontology
(GO)
classifications
All GO classifications(12)
Process carbon dioxide transport, morphogenesis of an epithelium...
Component cytoplasm, cytosol...
Function carbonate dehydratase activity, lyase activity...
External Resources: MouseFunc
Expression Literature Summary: (14 records)
Data Summary: Assays (7)    Results (120)    Tissues (110)    Images (42)
Theiler Stages: 15,17,19,20,22,24,26,28
  Assay Type Assays   Results
      RT-PCR 1   3
      RNA in situ 4   115
      Immunohistochemistry 2   2
cDNA source data(240)
External Resources: Allen Brain Atlas  GEO 
Molecular
reagents
All nucleic(249) Genomic(5) cDNA(241) Primer pair(2) Other(1) Antibodies(1)
Microarray probesets(2)
Other database
links
EC 4.2.1.1
Ensembl Gene Model ENSMUSG00000027562
DoTS DT.101405047, DT.536972, DT.94218800
UniGene 1186
DFCI TC1573115, TC1631378
NIA Mouse Gene Index U003042
Entrez Gene 12349
International Mouse Knockout Project Status Car2
Protein
domains
InterPro ID Description
IPR001148 Carbonic anhydrase, alpha-class, catalytic domain
IPR018338 Carbonic anhydrase, alpha-class, conserved site
IPR018440 Carbonic anhydrase, CA-II
Graphical View of Protein Domain Structure
References
(Earliest) J:5671 Davisson MT et al., "Genes on chromosome 3 of the mouse." J Hered 1976 May-Jun;67(3):155-6
(Latest) J:152014 Sjoblom M et al., "Duodenal acidity 'sensing' but not epithelial HCO3- supply is critically dependent on carbonic anhydrase II expression." Proc Natl Acad Sci U S A 2009 Aug 4;106(31):13094-9
All references(82)
Other
accession IDs
MGD-MRK-11922, MGD-MRK-11945, MGD-MRK-1760, MGD-MRK-1763, MGI:2139632

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
11/20/2009
MGI_4.31
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The Jackson Laboratory