Amy2a5 MGI Mouse Gene Detail - MGI:88020

Amy2a5 Gene Detail

Symbol
Name
ID

Amy2a5
amylase 2a5
MGI:88020

Synonyms

Amy-2, Amy2, mAmy2-2

Genetic Map

Chromosome 3
50.0 cM
Detailed Genetic Map ± 1 cM

Mapping data( 38)

Sequence Map

Chr3:113052094-113061755 bp, - strand

(From VEGA annotation of NCBI Build 37)

VEGA ContigView | Ensembl ContigView | UCSC Browser | NCBI Map Viewer

Mouse Genome Browser

Mammalian
homology

human; chimpanzee; rat (Mammalian Orthology)

Comparative Map (Mouse/Human Amy2a5 ± 2 cM)

TreeFam: TF312850

Sequences

Representative Sequences				Length	Strain/Species	Flank
	genomic	OTTMUSG00000022434	VEGA Gene Model \| MGI Sequence Detail	9662	C57BL/6J	± Kb
	transcript	BC100579	GenBank \| EMBL \| DDBJ \| MGI Sequence Detail	1590	-
	polypeptide	Q8C5B4	UniProt \| EBI \| MGI Sequence Detail	508	Not Applicable

All sequences(15)

Polymorphisms

RFLP(8)

Gene Ontology
(GO)
classifications

All GO classifications(6)
Process	carbohydrate metabolic process, metabolic process...
Component	extracellular space
Function	amylase activity, hydrolase activity...
External Resources: MouseFunc

Expression

cDNA source data(11)

Molecular
reagents

All nucleic(17) Genomic(4) cDNA(12) Other(1)

Pathways

starch degradation

Other database
links

Ensembl Gene Model	ENSMUSG00000074268
Entrez Gene	109959 (also overlaps Amy2b)
VEGA Gene Model	OTTMUSG00000022434
International Mouse Knockout Project Status	Amy2a5

Protein
domains

InterPro ID	Description
IPR006046	Glycoside hydrolase family 13
IPR006047	Glycosyl hydrolase, family 13, catalytic domain
IPR006048	Alpha-amylase, C-terminal all beta
IPR006589	Glycosyl hydrolase, family 13, subfamily, catalytic domain
IPR013780	Glycosyl hydrolase, family 13, all-beta
IPR013781	Glycoside hydrolase, subgroup, catalytic core
IPR017853	Glycoside hydrolase, catalytic core

References

(Earliest) J:12977 Sick K et al., "Genetics of amylase isozymes in the mouse." Hereditas 1964;51():291-296
(Latest) J:118234 Sugino H, "Comparative genomic analysis of the mouse and rat amylase multigene family." FEBS Lett 2007 Feb 6;581(3):355-60

All references(56)

Other
accession IDs

MGD-MRK-1314, MGD-MRK-1316

Contributing Projects: Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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