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Actg1 Gene Detail
 Symbol
Name
ID
Actg1
actin, gamma, cytoplasmic 1
MGI:87906


Nomenclature History
Synonyms Actl, E51
Genetic Map
Chromosome 11
cytoband E2
 
Mapping data( 2)
Sequence Map
Chr11:120207004-120209856 bp, - strand
(From VEGA annotation of NCBI Build 37)
VEGA ContigView | Ensembl ContigView | UCSC Browser | NCBI Map Viewer

Mouse Genome Browser
Mammalian
homology
human; cattle; dog, domestic; rat    (Mammalian Orthology)
Protein SuperFamily: Actin
TreeFam: TF300361
Sequences
Representative Sequences Length Strain/Species Flank
genomic OTTMUSG00000004137 VEGA Gene Model | MGI Sequence Detail 2853 C57BL/6J ± Kb
transcript NM_009609 RefSeq | MGI Sequence Detail 1931 FVB/N
polypeptide P63260 UniProt | EBI | MGI Sequence Detail 375 Not Applicable
For the selected sequences
All sequences(52)
Alleles
and
phenotypes
All alleles(3) : Targeted, knock-out(2) Targeted, other(1)
Mice in which this gene has been conditionally disrupted in muscle tissue display a reduced mobility and classical hind limb contractures when suspended by the tail. Mice homozygous for a null allele exhibit prenatal lethality, premature death, and progressive hearing loss.
Polymorphisms SNPs within 2kb(1 from dbSNP Build 128)  
Gene Ontology
(GO)
classifications
All GO classifications: (12 annotations)
Process sarcomere organization
Component actin cytoskeleton, costamere...
Function ATP binding, nucleotide binding...
External Resources: FuncBase
Expression Literature Summary: (8 records)
Data Summary: Assays (1)    Results (2)    Tissues (2)
Theiler Stages: 22,24
  Assay Type Assays   Results
      RNA in situ 1   2
cDNA source data(27)
External Resources: Allen Brain Atlas  GENSAT  GEO  ArrayExpress 
Molecular
reagents
All nucleic(30) Genomic(2) cDNA(27) Other(1)
Microarray probesets(5)
Other database
links
Ensembl Gene Model ENSMUSG00000062825
DoTS DT.101200000, DT.101335667, DT.101365895, DT.103564073, DT.87075159, DT.94160444, DT.94160460, DT.94160572
Consensus CDS Project CCDS25730.1
DFCI TC1573610
NIA Mouse Gene Index U004569, U058659, U064867, U089984, U115538, U124461, U124631
Entrez Gene 11465
VEGA Gene Model OTTMUSG00000004137
International Mouse Knockout Project Status Actg1
Protein
domains
InterPro ID Description
IPR004000 Actin/actin-like
IPR004001 Actin, conserved site
IPR020902 Actin/actin-like conserved site
Graphical View of Protein Domain Structure
References
(Earliest) J:31028 Cleveland DW et al., "Number and evolutionary conservation of alpha- and beta-tubulin and cytoplasmic beta- and gamma-actin genes using specific cloned cDNA probes." Cell 1980 May;20(1):95-105
(Latest) J:150861 Kathiresan T et al., "A protein interaction network for the large conductance Ca2+-activated K+ channel in the mouse cochlea." Mol Cell Proteomics 2009 May 7;():
All references(30)
Other
accession IDs
MGD-MRK-1090, MGD-MRK-38474, MGI:109429, MGI:2144346

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
02/06/2010
MGI_4.32
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