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Acads Gene Detail
 Symbol
Name
ID
Acads
acyl-Coenzyme A dehydrogenase, short chain
MGI:87868


Nomenclature History
Synonyms Bcd-1, Bcd1, SCAD
Genetic Map
Chromosome 5
65.0 cM
Detailed Genetic Map ± 1 cM
 
Mapping data( 13)

Sequence Map
Chr5:115560308-115569355 bp, - strand
(From VEGA annotation of NCBI Build 37)
VEGA ContigView | Ensembl ContigView | UCSC Browser | NCBI Map Viewer

Mouse Genome Browser
Mammalian
homology
human; chimpanzee; cattle; dog, domestic; rat    (Mammalian Orthology)
Comparative Map (Mouse/Human Acads ± 2 cM)
Protein SuperFamily: acyl-CoA dehydrogenase
TreeFam: TF105019
Sequences
Representative Sequences Length Strain/Species Flank
genomic OTTMUSG00000014625 VEGA Gene Model | MGI Sequence Detail 9048 C57BL/6J ± Kb
transcript NM_007383 RefSeq | MGI Sequence Detail 1880 FVB/N
polypeptide Q07417 UniProt | EBI | MGI Sequence Detail 412 Not Applicable
For the selected sequences
All sequences(19)
Alleles
and
phenotypes
All alleles(4) : Gene trapped(1) Spontaneous(1) Other(2)
Mice homozygous for disruptions in this gene display organic acidurea and develop hypoglycemia and fatty livers after fasting.
Associated Human Diseases (1)   Alleles Annotated to Human Diseases (1)  
Polymorphisms All PCR and RFLP(16) : PCR(2) RFLP(14) SNPs within 2kb(24 from dbSNP Build 128)  
Gene Ontology
(GO)
classifications
All GO classifications: (13 annotations)
Process fatty acid metabolic process, lipid metabolic process...
Component mitochondrion
Function acyl-CoA dehydrogenase activity, butyryl-CoA dehydrogenase activity...
External Resources: FuncBase
Expression Literature Summary: (1 records)
Data Summary: Assays (1)    Results (8)    Tissues (8)
Theiler Stages: 28
  Assay Type Assays   Results
      Northern blot 1   8
cDNA source data(115)
External Resources: Allen Brain Atlas  GEO  ArrayExpress 
Molecular
reagents
All nucleic(119) Genomic(2) cDNA(115) Primer pair(2)
Microarray probesets(2)
Other database
links
EC 1.3.99.2
Ensembl Gene Model ENSMUSG00000029545
DoTS DT.101127711, DT.534266
Consensus CDS Project CCDS19579.1
UniGene 18759
DFCI TC1576568, TC1771810
NIA Mouse Gene Index U026619
Entrez Gene 11409
VEGA Gene Model OTTMUSG00000014625
International Mouse Knockout Project Status Acads
Protein
domains
InterPro ID Description
IPR006089 Acyl-CoA dehydrogenase, conserved site
IPR006090 Acyl-CoA oxidase/dehydrogenase, type 1
IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain
IPR006092 Acyl-CoA dehydrogenase, N-terminal
IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal
IPR009100 Acyl-CoA dehydrogenase/oxidase
IPR013764 Acyl-CoA oxidase/dehydrogenase, type1/2, C-terminal
IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal
Graphical View of Protein Domain Structure
References
(Earliest) J:6531 Seeley TL et al., "Genetics and ontogeny of butyryl CoA dehydrogenase in the mouse and linkage of Bcd-1 with Dao-1." Biochem Genet 1981 Apr;19(3-4):333-45
(Latest) J:151002 Pagliarini DJ et al., "A mitochondrial protein compendium elucidates complex I disease biology." Cell 2008 Jul 11;134(1):112-23
All references(35)
Other
accession IDs
MGD-MRK-1025, MGD-MRK-1517, MGD-MRK-1518, MGI:2140816

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
02/06/2010
MGI_4.32
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