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Rnf113a1 Gene Detail
 Symbol
Name
ID
Rnf113a1
ring finger protein 113A1
MGI:1917192

Nomenclature History
Synonyms 2810428C21Rik
Genetic Map
Chromosome X
Syntenic
 
Mapping data( 1)
Sequence Map
ChrX:34731240-34732462 bp, + strand
(From VEGA annotation of NCBI Build 37)
VEGA ContigView | Ensembl ContigView | UCSC Browser | NCBI Map Viewer

Mouse Genome Browser
Mammalian
homology
cattle; rat    (Mammalian Orthology)
TreeFam: TF313469
Sequences
Representative Sequences Length Strain/Species Flank
genomic OTTMUSG00000017123 VEGA Gene Model | MGI Sequence Detail 1223 C57BL/6J ± Kb
transcript NM_153503 RefSeq | MGI Sequence Detail 1140 CZECHII
polypeptide NP_705723 RefSeq | MGI Sequence Detail 341 CZECHII
For the selected sequences
All sequences(10)
Alleles
and
phenotypes 		All alleles(1) : Targeted, knock-out(1)
Polymorphisms SNPs within 2kb(5 from dbSNP Build 128)  
Gene Ontology
(GO)
classifications
All GO classifications: (4 annotations)
Process biological_process
Component cellular_component
Function metal ion binding, zinc ion binding...
External Resources: FuncBase
Expression Literature Summary: (2 records)
Data Summary: Assays (2)    Results (17)    Tissues (17)    Images (2)
Theiler Stages: 16,17,21
  Assay Type Assays   Results
      RNA in situ 2   17
cDNA source data(20)
External Resources: GEO  ArrayExpress 
Molecular
reagents 		All nucleic(20) cDNA(20)
Microarray probesets(2)
Other database
links
Ensembl Gene Model ENSMUSG00000036537
Consensus CDS Project CCDS30072.1
UniGene 307182
DFCI TC1583498
Entrez Gene 69942
VEGA Gene Model OTTMUSG00000017123
International Mouse Knockout Project Status Rnf113a1
Protein
domains
InterPro ID Description
IPR000571 Zinc finger, CCCH-type
IPR001841 Zinc finger, RING-type
IPR017907 Zinc finger, RING-type, conserved site
References
(Earliest) J:65060 Kawai J et al., "Functional annotation of a full-length mouse cDNA collection." Nature 2001 Feb 8;409(6821):685-90
(Latest) J:116773 Oda M et al., "DNA methylation regulates long-range gene silencing of an X-linked homeobox gene cluster in a lineage-specific manner." Genes Dev 2006 Dec 15;20(24):3382-94
All references(6)
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
02/06/2010
MGI_4.32
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