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Aldh9a1 Gene Detail
 Symbol
Name
ID
Aldh9a1
aldehyde dehydrogenase 9, subfamily A1
MGI:1861622

Nomenclature History
Synonyms ESTM40, TMABA-DH
Genetic Map
Chromosome 1
cytoband H2
 
Mapping data( 3)
Sequence Map
Chr1:169280344-169298414 bp, + strand
(From Ensembl annotation of NCBI Build 37)
Ensembl ContigView | UCSC Browser | NCBI Map Viewer

Mouse Genome Browser
Mammalian
homology
human; chimpanzee; cattle; rat    (Mammalian Orthology)
Protein SuperFamily: NAD-dependent aldehyde dehydrogenase
TreeFam: TF314257
Sequences
Representative Sequences Length Strain/Species Flank
genomic ENSMUSG00000026687 Ensembl Gene Model | MGI Sequence Detail 18071 C57BL/6J ± Kb
transcript NM_019993 RefSeq | MGI Sequence Detail 2834 C57BL/6
polypeptide Q9JLJ2 UniProt | EBI | MGI Sequence Detail 494 Not Applicable
For the selected sequences
All sequences(49)
Polymorphisms SNPs within 2kb(96 from dbSNP Build 128)  
Gene Ontology
(GO)
classifications
All GO classifications: (12 annotations)
Process carnitine metabolic process, metabolic process...
Component cytoplasm, cytosol...
Function 4-trimethylammoniobutyraldehyde dehydrogenase activity, aldehyde dehydrogenase (NAD) activity...
External Resources: FuncBase
Expression Literature Summary: (1 records)
cDNA source data(13)
External Resources: Allen Brain Atlas  GEO  ArrayExpress 
Molecular
reagents 		All nucleic(14) cDNA(13) Primer pair(1)
Microarray probesets(1)
Pathways
putrescine degradation III
fatty acid α-oxidation
β-alanine biosynthesis I
L-carnitine biosynthesis
L-lactaldehyde degradation (aerobic)
Other database
links
EC 1.2.1.3, 1.2.1.47
Ensembl Gene Model ENSMUSG00000026687
DoTS DT.535923
Consensus CDS Project CCDS35765.1
DFCI TC1572145
NIA Mouse Gene Index U001056
Entrez Gene 56752
International Mouse Knockout Project Status Aldh9a1
Protein
domains
InterPro ID Description
IPR015590 Aldehyde dehydrogenase
IPR016160 Aldehyde dehydrogenase, conserved site
IPR016161 Aldehyde/histidinol dehydrogenase
IPR016162 Aldehyde dehydrogenase, N-terminal
IPR016163 Aldehyde dehydrogenase, C-terminal
Graphical View of Protein Domain Structure
References
(Earliest) J:52606 Eddleston J et al., "Physical and transcriptional map of a 3-Mb region of mouse chromosome 1 containing the gene for the neural tube defect mutant loop-tail (Lp)." Genomics 1999 Mar 1;56(2):149-59
(Latest) J:145577 Levi BP et al., "Aldehyde dehydrogenase 1a1 is dispensable for stem cell function in the mouse hematopoietic and nervous systems." Blood 2009 Feb 19;113(8):1670-80
All references(7)
Other
accession IDs 		MGI:1334434
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
02/06/2010
MGI_4.32
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