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Papss2 Gene Detail
 Symbol
Name
ID
Papss2
3'-phosphoadenosine 5'-phosphosulfate synthase 2
MGI:1330223


Nomenclature History
Synonyms 1810018P12Rik, Atpsk2, Sk2
Genetic Map
Chromosome 19
32.0 cM
Detailed Genetic Map ± 1 cM
 
Mapping data( 29)

Sequence Map
Chr19:32694495-32741677 bp, + strand
(From NCBI annotation of NCBI Build 37)
Ensembl ContigView | UCSC Browser | NCBI Map Viewer

Mouse Genome Browser
Mammalian
homology
human; cattle; dog, domestic; rat; guinea pig    (Mammalian Orthology)
Comparative Map (Mouse/Human Papss2 ± 2 cM)
Protein SuperFamily: 3'-phosphoadenosine-5'-phosphosulfate synthetase
TreeFam: TF313143
Sequences
Representative Sequences Length Strain/Species Flank
genomic 23972 NCBI Gene Model | MGI Sequence Detail 47183 C57BL/6J ± Kb
transcript NM_011864 RefSeq | MGI Sequence Detail 3635 C57BL/6
polypeptide O88428 UniProt | EBI | MGI Sequence Detail 621 Not Applicable
For the selected sequences
All sequences(37)
Alleles
and
phenotypes
All alleles(3) : Gene trapped(2) Spontaneous(1)
Mice homozygous for mutation s in this gene display delayed growth and shorter limbs and other abnormalities in bone formation.
Associated Human Diseases (1)   Alleles Annotated to Human Diseases (1)   Phenotype Images (1)  
Polymorphisms PCR(1) SNPs within 2kb(396 from dbSNP Build 128)  
Gene Ontology
(GO)
classifications
All GO classifications(14)
Process blood coagulation, bone development...
Function adenylylsulfate kinase activity, ATP binding...
External Resources: MouseFunc
Expression Literature Summary: (5 records)
Data Summary: Assays (5)    Results (71)    Tissues (56)    Images (28)
Theiler Stages: 19,20,21,22,24,28
  Assay Type Assays   Results
      RT-PCR 3   17
      RNA in situ 2   54
cDNA source data(58)
External Resources: Allen Brain Atlas  GENSAT  GEO 
Molecular
reagents
All nucleic(67) Genomic(2) cDNA(58) Primer pair(6) Other(1)
Microarray probesets(5)
Pathways
sulfate activation for sulfonation
sulfur metabolism
Other database
links
EC 2.7.1.25, 2.7.7.4
Ensembl Gene Model ENSMUSG00000024899
DoTS DT.101718472, DT.111150560, DT.493334, DT.91303059, DT.91366198
UniGene 203916
DFCI TC1579822, TC1598103, TC1623474
NIA Mouse Gene Index U038971, U044000
Entrez Gene 23972
International Mouse Knockout Project Status Papss2
Protein
domains
InterPro ID Description
IPR002650 Sulphate adenylyltransferase
IPR002891 Adenylylsulphate kinase, C-terminal
IPR014729 Rossmann-like alpha/beta/alpha sandwich fold
IPR015947 Pseudouridine synthase/archaeosine transglycosylase-like
Graphical View of Protein Domain Structure
References
(Earliest) J:5109 Lane PW et al., "Three recessive mutations producing disproportionate dwarfing in mice: achondroplasia, brachymorphic, and stubby." J Hered 1968 Sep-Oct;59(5):300-8
(Latest) J:152865 Georgas K et al., "Analysis of early nephron patterning reveals a role for distal RV proliferation in fusion to the ureteric tip via a cap mesenchyme-derived connecting segment." Dev Biol 2009 Aug 15;332(2):273-86
All references(44)
Other
accession IDs
MGD-MRK-1582, MGI:1921420, MGI:2147481, MGI:88171

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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Funding Information
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last database update
11/20/2009
MGI_4.31
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The Jackson Laboratory