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Rasgrp1 Gene Detail
 Symbol
Name
ID
Rasgrp1
RAS guanyl releasing protein 1
MGI:1314635


Nomenclature History
Genetic Map
Chromosome 2
65.0 cM
Detailed Genetic Map ± 1 cM
 
Mapping data( 4)

Sequence Map
Chr2:117105719-117168737 bp, - strand
(From VEGA annotation of NCBI Build 37)
VEGA ContigView | Ensembl ContigView | UCSC Browser | NCBI Map Viewer

Mouse Genome Browser
Mammalian
homology
human; chimpanzee; cattle; dog, domestic; rat    (Mammalian Orthology)
Comparative Map (Mouse/Human Rasgrp1 ± 2 cM)
TreeFam: TF312918
Sequences
Representative Sequences Length Strain/Species Flank
genomic OTTMUSG00000015228 VEGA Gene Model | MGI Sequence Detail 63019 C57BL/6J ± Kb
transcript NM_011246 RefSeq | MGI Sequence Detail 5155 C57BL/6
polypeptide Q9Z1S3 UniProt | EBI | MGI Sequence Detail 795 Not Applicable
For the selected sequences
All sequences(24)
Alleles
and
phenotypes
All alleles(4) : Targeted, knock-out(1) Targeted, other(2) Spontaneous(1)
Homozygotes for spontaneous and targeted null mutations exhibit a lymphoproliferative autoimmune syndrome in which T cells fail to activate Ras or proliferate after antigen exposure, defects in positive selection, and enlarged spleen and lymph nodes.
Associated Human Diseases (1)   Alleles Annotated to Human Diseases (1)  
Polymorphisms RFLP(1) SNPs within 2kb(305 from dbSNP Build 128)  
Gene Ontology
(GO)
classifications
All GO classifications: (16 annotations)
Process cell differentiation, intracellular signaling cascade...
Component cytoplasm, endoplasmic reticulum...
Function calcium ion binding, guanyl-nucleotide exchange factor activity...
External Resources: FuncBase
Expression Literature Summary: (2 records)
Data Summary: Assays (1)    Results (2)    Tissues (2)
Theiler Stages: 21,25
  Assay Type Assays   Results
      RT-PCR 1   2
cDNA source data(38)
External Resources: Allen Brain Atlas  GENSAT  GEO  ArrayExpress 
Molecular
reagents
All nucleic(44) Genomic(3) cDNA(40) Primer pair(1)
Microarray probesets(3)
Other database
links
Ensembl Gene Model ENSMUSG00000027347
DoTS DT.101210636, DT.91376852
Consensus CDS Project CCDS16572.1
UniGene 42150
DFCI TC1587889, TC1609935, TC1651697
NIA Mouse Gene Index U023201
Entrez Gene 19419
VEGA Gene Model OTTMUSG00000015228
International Mouse Knockout Project Status Rasgrp1
Protein
domains
InterPro ID Description
IPR000651 Ras-like guanine nucleotide exchange factor, N-terminal
IPR001895 Guanine-nucleotide dissociation stimulator CDC25
IPR002219 Protein kinase C-like, phorbol ester/diacylglycerol binding
IPR008937 Ras guanine nucleotide exchange factor
IPR011992 EF-hand-like domain
IPR018247 EF-Hand 1, calcium-binding site
IPR018249 EF-HAND 2
IPR020454 Diacylglycerol/phorbol-ester binding
Graphical View of Protein Domain Structure
References
(Earliest) J:46742 Bottorff D et al., "RasGRP, a Ras activator: mouse and human cDNA sequences and chromosomal positions." Mamm Genome 1999 Apr;10(4):358-61
(Latest) J:147172 Tazmini G et al., "Membrane localization of RasGRP1 is controlled by an EF-hand, and by the GEF domain." Biochim Biophys Acta 2009 Mar;1793(3):447-61
All references(22)

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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last database update
02/06/2010
MGI_4.32
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The Jackson Laboratory