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Sart1 Gene Detail
 Symbol
Name
ID
Sart1
squamous cell carcinoma antigen recognized by T-cells 1
MGI:1309453


Nomenclature History
Synonyms U5-110K
Genetic Map
Chromosome 19
cytoband A
 
Mapping data( 2)
Sequence Map
Chr19:5377523-5388703 bp, - strand
(From NCBI annotation of NCBI Build 37)
Ensembl ContigView | UCSC Browser | NCBI Map Viewer

Mouse Genome Browser
Mammalian
homology
human; cattle; dog, domestic; rat    (Mammalian Orthology)
TreeFam: TF318828
Sequences
Representative Sequences Length Strain/Species Flank
genomic 20227 NCBI Gene Model | MGI Sequence Detail 11181 C57BL/6J ± Kb
transcript NM_016882 RefSeq | MGI Sequence Detail 5091 -
polypeptide Q9Z315 UniProt | EBI | MGI Sequence Detail 806 Not Applicable
For the selected sequences
All sequences(14)
Alleles
and
phenotypes
All alleles(13) : Targeted, knock-out(1) Targeted, other(1) Gene trapped(11)
Polymorphisms SNPs within 2kb(21 from dbSNP Build 128)  
Gene Ontology
(GO)
classifications
All GO classifications: (4 annotations)
Process mRNA processing, RNA splicing...
Component nucleus, spliceosomal complex...
External Resources: FuncBase
Expression Literature Summary: (2 records)
Data Summary: Assays (3)    Results (48)    Tissues (46)    Images (2)
Theiler Stages: 2,3,4,5,17,18,21,28
  Assay Type Assays   Results
      RT-PCR 1   15
      RNA in situ 2   33
cDNA source data(4)
External Resources: Allen Brain Atlas  GEO  ArrayExpress 
Molecular
reagents
All nucleic(8) cDNA(7) Primer pair(1)
Microarray probesets(2)
Other database
links
Ensembl Gene Model ENSMUSG00000039148
Consensus CDS Project CCDS29460.1
DFCI TC1576603, TC1607709
Entrez Gene 20227
International Mouse Knockout Project Status Sart1
Protein
domains
InterPro ID Description
IPR005011 SART-1 protein
Graphical View of Protein Domain Structure
References
(Earliest) J:49838 Gotoh M et al., "Sequence analysis of genes encoding rodent homologues of the human tumor-rejection antigen SART-1." Jpn J Cancer Res 1998 Aug;89(8):849-54
(Latest) J:114871 Chen YI et al., "Epitope tagging of proteins at the native chromosomal loci of genes in mice and in cultured vertebrate cells." J Mol Biol 2006 Aug 18;361(3):412-9
All references(11)

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
02/06/2010
MGI_4.32
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The Jackson Laboratory