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Psen1 Gene Detail
 Symbol
Name
ID
Psen1
presenilin 1
MGI:1202717


Nomenclature History
Synonyms Ad3h, presenilin-1, PS-1, PS1, S182
Genetic Map
Chromosome 12
37.0 cM
Detailed Genetic Map ± 1 cM
 
Mapping data( 2)

Sequence Map
Chr12:85029513-85076149 bp, + strand
(From NCBI annotation of NCBI Build 37)
Ensembl ContigView | UCSC Browser | NCBI Map Viewer

Mouse Genome Browser
Mammalian
homology
human; chimpanzee; cattle; dog, domestic; lemur, mouse; rat    (Mammalian Orthology)
Comparative Map (Mouse/Human Psen1 ± 2 cM)
Protein SuperFamily: presenilin
TreeFam: TF315040
Sequences
Representative Sequences Length Strain/Species Flank
genomic 19164 NCBI Gene Model | MGI Sequence Detail 46637 C57BL/6J ± Kb
transcript NM_008943 RefSeq | MGI Sequence Detail 3023 C57BL/6
polypeptide P49769 UniProt | EBI | MGI Sequence Detail 467 Not Applicable
For the selected sequences
All sequences(29)
Alleles
and
phenotypes
All alleles(26) : Targeted, knock-out(8) Targeted, other(8) Gene trapped(10)
Homozygotes for targeted null mutations exhibit deformed axial skeletons, reduced Notch signaling, impaired brain growth with a deficiency of neural stem cells, cerebral hemorrhages, inhibited cleavage of amyloid precursor protein, and perinatal death.
Associated Human Diseases (5)   Alleles Annotated to Human Diseases (10)   Phenotype Images (1)  
Polymorphisms SNPs within 2kb(249 from dbSNP Build 128)  
Gene Ontology
(GO)
classifications
All GO classifications(134)
Process activation of MAPKK activity, amyloid precursor protein catabolic process...
Component axon, cell soma...
Function beta-catenin binding, cadherin binding...
This is a GO Consortium Reference Genome Project gene.
External Resources: MouseFunc
Expression Literature Summary: (21 records)
Data Summary: Assays (6)    Results (62)    Tissues (55)    Images (9)
Theiler Stages: 21,22,23,25,28
  Assay Type Assays   Results
      Western blot 2   6
      RT-PCR 2   47
      RNA in situ 1   4
      Immunohistochemistry 1   5
cDNA source data(134)
External Resources: Allen Brain Atlas  GENSAT  GEO 
Molecular
reagents
All nucleic(139) Genomic(1) cDNA(135) Primer pair(2) Other(1) Antibodies(2)
Microarray probesets(4)
Other database
links
Ensembl Gene Model ENSMUSG00000019969
DoTS DT.534651, DT.94267072, DT.94267073
UniGene 998
DFCI TC1574174, TC1595337
NIA Mouse Gene Index U014175
Entrez Gene 19164
International Mouse Knockout Project Status Psen1
Protein
domains
InterPro ID Description
IPR001108 Peptidase A22A, presenilin
IPR002031 Peptidase A22A, presenilin 1
IPR006639 Peptidase A22, presenilin signal peptide
Graphical View of Protein Domain Structure
References
(Earliest) J:37100 Sherrington R et al., "Cloning of a gene bearing missense mutations in early-onset familial Alzheimer's disease [see comments]" Nature 1995 Jun 29;375(6534):754-60
(Latest) J:154114 Ferjentsik Z et al., "Notch is a critical component of the mouse somitogenesis oscillator and is essential for the formation of the somites." PLoS Genet 2009 Sep;5(9):e1000662
All references(256)
Other
accession IDs
MGD-MRK-35912, MGI:107441

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
11/20/2009
MGI_4.31
Web browser compatibility
The Jackson Laboratory