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Cpt1a Gene Detail
 Symbol
Name
ID
Cpt1a
carnitine palmitoyltransferase 1a, liver
MGI:1098296


Nomenclature History
Synonyms Cpt1, CPTI, L-CPT I
Genetic Map
Chromosome 19
2.0 cM
Detailed Genetic Map ± 1 cM
 
Mapping data( 3)

Sequence Map
Chr19:3323348-3384119 bp, + strand
(From Ensembl annotation of NCBI Build 37)
Ensembl ContigView | UCSC Browser | NCBI Map Viewer

Mouse Genome Browser
Mammalian
homology
human; chimpanzee; dog, domestic; rat    (Mammalian Orthology)
Comparative Map (Mouse/Human Cpt1a ± 2 cM)
TreeFam: TF313836
Sequences
Representative Sequences Length Strain/Species Flank
genomic ENSMUSG00000024900 Ensembl Gene Model | MGI Sequence Detail 60772 C57BL/6J ± Kb
transcript NM_013495 RefSeq | MGI Sequence Detail 4331 C57BL/6
polypeptide P97742 UniProt | EBI | MGI Sequence Detail 773 Not Applicable
For the selected sequences
All sequences(28)
Alleles
and
phenotypes
All alleles(25) : Targeted, knock-out(1) Gene trapped(24)
Homozygous null mice display embryonic lethality. Heterozygous null mice display decreased serum glucose and increased serum free fatty acid levels after fasting.
Associated Human Diseases (1)   Alleles Annotated to Human Diseases (1)  
Polymorphisms RFLP(1) SNPs within 2kb(171 from dbSNP Build 128)  
Gene Ontology
(GO)
classifications
All GO classifications: (12 annotations)
Process fatty acid metabolic process, lipid metabolic process...
Component integral to membrane, membrane...
Function acyltransferase activity, carnitine O-palmitoyltransferase activity...
External Resources: FuncBase
Expression Literature Summary: (2 records)
Data Summary: Assays (2)    Results (100)    Tissues (96)    Images (23)
Theiler Stages: 22,28
  Assay Type Assays   Results
      RNA in situ 2   100
cDNA source data(19)
External Resources: Allen Brain Atlas  GENSAT  GEO  ArrayExpress 
Molecular
reagents
All nucleic(24) Genomic(3) cDNA(20) Primer pair(1)
Microarray probesets(2)
Other database
links
EC 2.3.1.21
Ensembl Gene Model ENSMUSG00000024900
Consensus CDS Project CCDS29395.1
NIA Mouse Gene Index U038771
Entrez Gene 12894
International Mouse Knockout Project Status Cpt1a
Protein
domains
InterPro ID Description
IPR000542 Acyltransferase ChoActase/COT/CPT
Graphical View of Protein Domain Structure
References
(Earliest) J:16140 Gelb BD, "Genomic structure of and a cardiac promoter for the mouse carnitine palmitoyltransferase II gene." Genomics 1993 Dec;18(3):651-5
(Latest) J:151002 Pagliarini DJ et al., "A mitochondrial protein compendium elucidates complex I disease biology." Cell 2008 Jul 11;134(1):112-23
All references(19)
Other
accession IDs
MGD-MRK-2118, MGI:2147452, MGI:2147463

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
02/06/2010
MGI_4.32
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The Jackson Laboratory