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Nfatc3 Gene Detail
 Symbol
Name
ID
Nfatc3
nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 3
MGI:103296


Nomenclature History
Synonyms D8Ertd281e, NFAT4, NFATx
Genetic Map
Chromosome 8
51.0 cM, cytoband D
Detailed Genetic Map ± 1 cM
 
Mapping data( 8)

Sequence Map
Chr8:108583503-108654437 bp, + strand
(From NCBI annotation of NCBI Build 37)
Ensembl ContigView | UCSC Browser | NCBI Map Viewer

Mouse Genome Browser
Mammalian
homology
human; chimpanzee; cattle; dog, domestic; rat    (Mammalian Orthology)
Comparative Map (Mouse/Human Nfatc3 ± 2 cM)
TreeFam: TF326480
Sequences
Representative Sequences Length Strain/Species Flank
genomic 18021 NCBI Gene Model | MGI Sequence Detail 70935 C57BL/6J ± Kb
transcript NM_010901 RefSeq | MGI Sequence Detail 6032 C57BL/6
polypeptide P97305 UniProt | EBI | MGI Sequence Detail 1075 Not Applicable
For the selected sequences
All sequences(46)
Alleles
and
phenotypes
All alleles(37) : Targeted, knock-out(2) Targeted, other(1) Gene trapped(34)
Mice homozygous for disruptions in this gene experience some embryonic lethality and reduced body size. Developmental defects also exist in the immune system , skeletal muscle, vasculature, heart, and sensory nerves.
Associated Human Diseases (1)   Alleles Annotated to Human Diseases (1)  
Polymorphisms SNPs within 2kb(156 from dbSNP Build 128)  
Gene Ontology
(GO)
classifications
All GO classifications: (15 annotations)
Process cellular respiration, heart development...
Component cytoplasm, nucleus...
Function chromatin binding, DNA binding...
External Resources: FuncBase
Expression Literature Summary: (13 records)
Data Summary: Assays (4)    Results (45)    Tissues (43)    Images (4)
Theiler Stages: 17,21,24,28
  Assay Type Assays   Results
      RT-PCR 2   12
      RNA in situ 2   33
cDNA source data(130)
External Resources: Allen Brain Atlas  GEO  ArrayExpress 
Molecular
reagents
All nucleic(138) cDNA(134) Primer pair(4)
Microarray probesets(4)
Other database
links
Ensembl Gene Model ENSMUSG00000031902
DoTS DT.101387568, DT.101737263, DT.101737264, DT.94409379
Consensus CDS Project CCDS22628.1
UniGene 383185
NIA Mouse Gene Index U009766
Entrez Gene 18021
International Mouse Knockout Project Status Nfatc3
Protein
domains
InterPro ID Description
IPR002909 Cell surface receptor IPT/TIG
IPR008366 Nuclear factor of activated T cells (NFAT)
IPR008967 p53-like transcription factor, DNA-binding
IPR011539 Rel homology
IPR013783 Immunoglobulin-like fold
IPR014756 Immunoglobulin E-set
IPR018286 Nuclear factor of activated T cells (NFAT), subgroup
Graphical View of Protein Domain Structure
References
(Earliest) J:24518 Lin X et al., "Isolation and characterization of a novel mitogenic regulatory gene, 322, which is transcriptionally suppressed in cells transformed by src and ras." Mol Cell Biol 1995 May;15(5):2754-62
(Latest) J:153636 Zeini M et al., "Spatial and temporal regulation of coronary vessel formation by calcineurin-NFAT signaling." Development 2009 Oct;136(19):3335-45
All references(62)
Other
accession IDs
MGD-MRK-24179, MGI:1098734, MGI:2142861

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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Funding Information
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last database update
02/06/2010
MGI_4.32
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The Jackson Laboratory