Gene_Ontology
        biological_process
                cellular process
                        cellular metabolic process
                                cellular macromolecule metabolic process
                                        cellular protein metabolic process
                                                CAAX-box protein maturation +
                                                cellular protein catabolic process +
                                                cellular protein modification process [GO:0006464] (2322 genes, 4858 annotations)
                                                        actin modification +
                                                        attachment of GPI anchor to protein
                                                        charged-tRNA amino acid modification +
                                                        co-translational protein modification +
                                                        enzyme active site formation +
                                                        formation of oxidatively modified proteins involved in replicative cell aging
                                                        histone modification +
                                                        ISG15-protein conjugation
                                                        metal incorporation into metallo-molybdopterin complex +
                                                        metal incorporation into metallo-oxygen cluster +
                                                        metal incorporation into metallo-sulfur cluster +
                                                        N-terminal protein amino acid modification +
                                                        negative regulation of protein modification process +
                                                        nucleic acid-protein covalent cross-linking +
                                                        peptide cross-linking +
                                                        peptidyl-amino acid modification +
                                                        positive regulation of protein modification process +
                                                        post-translational protein modification +
                                                        protein acylation +
                                                        protein alkylation +
                                                        protein amidation +
                                                        protein arginylation
                                                        protein biotinylation +
                                                        protein carbamoylation +
                                                        protein carboxylation +
                                                        protein de-ADP-ribosylation
                                                        protein deacylation +
                                                        protein dealkylation +
                                                        protein deamination +
                                                        protein deglutathionylation
                                                        protein deglycosylation +
                                                        protein dehydration +
                                                        protein delipidation
                                                        protein denucleotidylation +
                                                        protein dephosphorylation +
                                                        protein desulfurization
                                                        protein esterification +
                                                        protein flavinylation
                                                        protein glucuronidation +
                                                        protein glutathionylation +
                                                        protein glycosylation +
                                                        protein halogenation +
                                                        protein hydroxylation +
                                                        protein initiator methionine removal +
                                                        protein lipidation +
                                                        protein modification by small protein conjugation or removal +
                                                        protein nitrosylation +
                                                        protein nucleotidylation +
                                                        protein oxidation +
                                                        protein phosphopantetheinylation +
                                                        protein phosphorylation +
                                                        protein polyamination +
                                                        protein polyglycylation
                                                        protein prenylation +
                                                        protein sulfation +
                                                        protein sulfhydration +
                                                        protein tyrosinylation +
                                                        protein-chromophore linkage +
                                                        protein-cofactor linkage +
                                                        protein-tetrapyrrole linkage +
                                                        regulation of protein modification process +
                                                        sulfur incorporation into metallo-sulfur cluster
                                                        trans-translation-dependent protein tagging
                                                ferredoxin metabolic process +
                                                mitochondrial protein processing +
                                                negative regulation of cellular protein metabolic process +
                                                Notch receptor processing +
                                                positive regulation of cellular protein metabolic process +
                                                prosthetic group metabolic process +
                                                protein folding +
                                                protein repair +
                                                protein unfolding
                                                regulation of cellular protein metabolic process +
                                                rhodopsin metabolic process +
                                                signal peptide processing +
                                                sterol regulatory element binding protein cleavage +
                                                translation +
                                                vacuolar protein processing

---

Gene_Ontology
        biological_process
                metabolic process
                        cellular metabolic process
                                cellular macromolecule metabolic process
                                        cellular protein metabolic process
                                                CAAX-box protein maturation +
                                                cellular protein catabolic process +
                                                cellular protein modification process [GO:0006464] (2322 genes, 4858 annotations)
                                                        actin modification +
                                                        attachment of GPI anchor to protein
                                                        charged-tRNA amino acid modification +
                                                        co-translational protein modification +
                                                        enzyme active site formation +
                                                        formation of oxidatively modified proteins involved in replicative cell aging
                                                        histone modification +
                                                        ISG15-protein conjugation
                                                        metal incorporation into metallo-molybdopterin complex +
                                                        metal incorporation into metallo-oxygen cluster +
                                                        metal incorporation into metallo-sulfur cluster +
                                                        N-terminal protein amino acid modification +
                                                        negative regulation of protein modification process +
                                                        nucleic acid-protein covalent cross-linking +
                                                        peptide cross-linking +
                                                        peptidyl-amino acid modification +
                                                        positive regulation of protein modification process +
                                                        post-translational protein modification +
                                                        protein acylation +
                                                        protein alkylation +
                                                        protein amidation +
                                                        protein arginylation
                                                        protein biotinylation +
                                                        protein carbamoylation +
                                                        protein carboxylation +
                                                        protein de-ADP-ribosylation
                                                        protein deacylation +
                                                        protein dealkylation +
                                                        protein deamination +
                                                        protein deglutathionylation
                                                        protein deglycosylation +
                                                        protein dehydration +
                                                        protein delipidation
                                                        protein denucleotidylation +
                                                        protein dephosphorylation +
                                                        protein desulfurization
                                                        protein esterification +
                                                        protein flavinylation
                                                        protein glucuronidation +
                                                        protein glutathionylation +
                                                        protein glycosylation +
                                                        protein halogenation +
                                                        protein hydroxylation +
                                                        protein initiator methionine removal +
                                                        protein lipidation +
                                                        protein modification by small protein conjugation or removal +
                                                        protein nitrosylation +
                                                        protein nucleotidylation +
                                                        protein oxidation +
                                                        protein phosphopantetheinylation +
                                                        protein phosphorylation +
                                                        protein polyamination +
                                                        protein polyglycylation
                                                        protein prenylation +
                                                        protein sulfation +
                                                        protein sulfhydration +
                                                        protein tyrosinylation +
                                                        protein-chromophore linkage +
                                                        protein-cofactor linkage +
                                                        protein-tetrapyrrole linkage +
                                                        regulation of protein modification process +
                                                        sulfur incorporation into metallo-sulfur cluster
                                                        trans-translation-dependent protein tagging
                                                ferredoxin metabolic process +
                                                mitochondrial protein processing +
                                                negative regulation of cellular protein metabolic process +
                                                Notch receptor processing +
                                                positive regulation of cellular protein metabolic process +
                                                prosthetic group metabolic process +
                                                protein folding +
                                                protein repair +
                                                protein unfolding
                                                regulation of cellular protein metabolic process +
                                                rhodopsin metabolic process +
                                                signal peptide processing +
                                                sterol regulatory element binding protein cleavage +
                                                translation +
                                                vacuolar protein processing

---

Gene_Ontology
        biological_process
                metabolic process
                        organic substance metabolic process
                                macromolecule metabolic process
                                        cellular macromolecule metabolic process
                                                cellular protein metabolic process
                                                        CAAX-box protein maturation +
                                                        cellular protein catabolic process +
                                                        cellular protein modification process [GO:0006464] (2322 genes, 4858 annotations)
                                                                actin modification +
                                                                attachment of GPI anchor to protein
                                                                charged-tRNA amino acid modification +
                                                                co-translational protein modification +
                                                                enzyme active site formation +
                                                                formation of oxidatively modified proteins involved in replicative cell aging
                                                                histone modification +
                                                                ISG15-protein conjugation
                                                                metal incorporation into metallo-molybdopterin complex +
                                                                metal incorporation into metallo-oxygen cluster +
                                                                metal incorporation into metallo-sulfur cluster +
                                                                N-terminal protein amino acid modification +
                                                                negative regulation of protein modification process +
                                                                nucleic acid-protein covalent cross-linking +
                                                                peptide cross-linking +
                                                                peptidyl-amino acid modification +
                                                                positive regulation of protein modification process +
                                                                post-translational protein modification +
                                                                protein acylation +
                                                                protein alkylation +
                                                                protein amidation +
                                                                protein arginylation
                                                                protein biotinylation +
                                                                protein carbamoylation +
                                                                protein carboxylation +
                                                                protein de-ADP-ribosylation
                                                                protein deacylation +
                                                                protein dealkylation +
                                                                protein deamination +
                                                                protein deglutathionylation
                                                                protein deglycosylation +
                                                                protein dehydration +
                                                                protein delipidation
                                                                protein denucleotidylation +
                                                                protein dephosphorylation +
                                                                protein desulfurization
                                                                protein esterification +
                                                                protein flavinylation
                                                                protein glucuronidation +
                                                                protein glutathionylation +
                                                                protein glycosylation +
                                                                protein halogenation +
                                                                protein hydroxylation +
                                                                protein initiator methionine removal +
                                                                protein lipidation +
                                                                protein modification by small protein conjugation or removal +
                                                                protein nitrosylation +
                                                                protein nucleotidylation +
                                                                protein oxidation +
                                                                protein phosphopantetheinylation +
                                                                protein phosphorylation +
                                                                protein polyamination +
                                                                protein polyglycylation
                                                                protein prenylation +
                                                                protein sulfation +
                                                                protein sulfhydration +
                                                                protein tyrosinylation +
                                                                protein-chromophore linkage +
                                                                protein-cofactor linkage +
                                                                protein-tetrapyrrole linkage +
                                                                regulation of protein modification process +
                                                                sulfur incorporation into metallo-sulfur cluster
                                                                trans-translation-dependent protein tagging
                                                        ferredoxin metabolic process +
                                                        mitochondrial protein processing +
                                                        negative regulation of cellular protein metabolic process +
                                                        Notch receptor processing +
                                                        positive regulation of cellular protein metabolic process +
                                                        prosthetic group metabolic process +
                                                        protein folding +
                                                        protein repair +
                                                        protein unfolding
                                                        regulation of cellular protein metabolic process +
                                                        rhodopsin metabolic process +
                                                        signal peptide processing +
                                                        sterol regulatory element binding protein cleavage +
                                                        translation +
                                                        vacuolar protein processing

---

Gene_Ontology
        biological_process
                metabolic process
                        organic substance metabolic process
                                macromolecule metabolic process
                                        macromolecule modification
                                                protein modification process
                                                        cellular protein modification process [GO:0006464] (2322 genes, 4858 annotations)
                                                                actin modification +
                                                                attachment of GPI anchor to protein
                                                                charged-tRNA amino acid modification +
                                                                co-translational protein modification +
                                                                enzyme active site formation +
                                                                formation of oxidatively modified proteins involved in replicative cell aging
                                                                histone modification +
                                                                ISG15-protein conjugation
                                                                metal incorporation into metallo-molybdopterin complex +
                                                                metal incorporation into metallo-oxygen cluster +
                                                                metal incorporation into metallo-sulfur cluster +
                                                                N-terminal protein amino acid modification +
                                                                negative regulation of protein modification process +
                                                                nucleic acid-protein covalent cross-linking +
                                                                peptide cross-linking +
                                                                peptidyl-amino acid modification +
                                                                positive regulation of protein modification process +
                                                                post-translational protein modification +
                                                                protein acylation +
                                                                protein alkylation +
                                                                protein amidation +
                                                                protein arginylation
                                                                protein biotinylation +
                                                                protein carbamoylation +
                                                                protein carboxylation +
                                                                protein de-ADP-ribosylation
                                                                protein deacylation +
                                                                protein dealkylation +
                                                                protein deamination +
                                                                protein deglutathionylation
                                                                protein deglycosylation +
                                                                protein dehydration +
                                                                protein delipidation
                                                                protein denucleotidylation +
                                                                protein dephosphorylation +
                                                                protein desulfurization
                                                                protein esterification +
                                                                protein flavinylation
                                                                protein glucuronidation +
                                                                protein glutathionylation +
                                                                protein glycosylation +
                                                                protein halogenation +
                                                                protein hydroxylation +
                                                                protein initiator methionine removal +
                                                                protein lipidation +
                                                                protein modification by small protein conjugation or removal +
                                                                protein nitrosylation +
                                                                protein nucleotidylation +
                                                                protein oxidation +
                                                                protein phosphopantetheinylation +
                                                                protein phosphorylation +
                                                                protein polyamination +
                                                                protein polyglycylation
                                                                protein prenylation +
                                                                protein sulfation +
                                                                protein sulfhydration +
                                                                protein tyrosinylation +
                                                                protein-chromophore linkage +
                                                                protein-cofactor linkage +
                                                                protein-tetrapyrrole linkage +
                                                                regulation of protein modification process +
                                                                sulfur incorporation into metallo-sulfur cluster
                                                                trans-translation-dependent protein tagging
                                                        protein modification process in other organism +

---

Gene_Ontology
        biological_process
                metabolic process
                        organic substance metabolic process
                                macromolecule metabolic process
                                        protein metabolic process
                                                cellular protein metabolic process
                                                        CAAX-box protein maturation +
                                                        cellular protein catabolic process +
                                                        cellular protein modification process [GO:0006464] (2322 genes, 4858 annotations)
                                                                actin modification +
                                                                attachment of GPI anchor to protein
                                                                charged-tRNA amino acid modification +
                                                                co-translational protein modification +
                                                                enzyme active site formation +
                                                                formation of oxidatively modified proteins involved in replicative cell aging
                                                                histone modification +
                                                                ISG15-protein conjugation
                                                                metal incorporation into metallo-molybdopterin complex +
                                                                metal incorporation into metallo-oxygen cluster +
                                                                metal incorporation into metallo-sulfur cluster +
                                                                N-terminal protein amino acid modification +
                                                                negative regulation of protein modification process +
                                                                nucleic acid-protein covalent cross-linking +
                                                                peptide cross-linking +
                                                                peptidyl-amino acid modification +
                                                                positive regulation of protein modification process +
                                                                post-translational protein modification +
                                                                protein acylation +
                                                                protein alkylation +
                                                                protein amidation +
                                                                protein arginylation
                                                                protein biotinylation +
                                                                protein carbamoylation +
                                                                protein carboxylation +
                                                                protein de-ADP-ribosylation
                                                                protein deacylation +
                                                                protein dealkylation +
                                                                protein deamination +
                                                                protein deglutathionylation
                                                                protein deglycosylation +
                                                                protein dehydration +
                                                                protein delipidation
                                                                protein denucleotidylation +
                                                                protein dephosphorylation +
                                                                protein desulfurization
                                                                protein esterification +
                                                                protein flavinylation
                                                                protein glucuronidation +
                                                                protein glutathionylation +
                                                                protein glycosylation +
                                                                protein halogenation +
                                                                protein hydroxylation +
                                                                protein initiator methionine removal +
                                                                protein lipidation +
                                                                protein modification by small protein conjugation or removal +
                                                                protein nitrosylation +
                                                                protein nucleotidylation +
                                                                protein oxidation +
                                                                protein phosphopantetheinylation +
                                                                protein phosphorylation +
                                                                protein polyamination +
                                                                protein polyglycylation
                                                                protein prenylation +
                                                                protein sulfation +
                                                                protein sulfhydration +
                                                                protein tyrosinylation +
                                                                protein-chromophore linkage +
                                                                protein-cofactor linkage +
                                                                protein-tetrapyrrole linkage +
                                                                regulation of protein modification process +
                                                                sulfur incorporation into metallo-sulfur cluster
                                                                trans-translation-dependent protein tagging
                                                        ferredoxin metabolic process +
                                                        mitochondrial protein processing +
                                                        negative regulation of cellular protein metabolic process +
                                                        Notch receptor processing +
                                                        positive regulation of cellular protein metabolic process +
                                                        prosthetic group metabolic process +
                                                        protein folding +
                                                        protein repair +
                                                        protein unfolding
                                                        regulation of cellular protein metabolic process +
                                                        rhodopsin metabolic process +
                                                        signal peptide processing +
                                                        sterol regulatory element binding protein cleavage +
                                                        translation +
                                                        vacuolar protein processing

---

Gene_Ontology
        biological_process
                metabolic process
                        organic substance metabolic process
                                macromolecule metabolic process
                                        protein metabolic process
                                                protein modification process
                                                        cellular protein modification process [GO:0006464] (2322 genes, 4858 annotations)
                                                                actin modification +
                                                                attachment of GPI anchor to protein
                                                                charged-tRNA amino acid modification +
                                                                co-translational protein modification +
                                                                enzyme active site formation +
                                                                formation of oxidatively modified proteins involved in replicative cell aging
                                                                histone modification +
                                                                ISG15-protein conjugation
                                                                metal incorporation into metallo-molybdopterin complex +
                                                                metal incorporation into metallo-oxygen cluster +
                                                                metal incorporation into metallo-sulfur cluster +
                                                                N-terminal protein amino acid modification +
                                                                negative regulation of protein modification process +
                                                                nucleic acid-protein covalent cross-linking +
                                                                peptide cross-linking +
                                                                peptidyl-amino acid modification +
                                                                positive regulation of protein modification process +
                                                                post-translational protein modification +
                                                                protein acylation +
                                                                protein alkylation +
                                                                protein amidation +
                                                                protein arginylation
                                                                protein biotinylation +
                                                                protein carbamoylation +
                                                                protein carboxylation +
                                                                protein de-ADP-ribosylation
                                                                protein deacylation +
                                                                protein dealkylation +
                                                                protein deamination +
                                                                protein deglutathionylation
                                                                protein deglycosylation +
                                                                protein dehydration +
                                                                protein delipidation
                                                                protein denucleotidylation +
                                                                protein dephosphorylation +
                                                                protein desulfurization
                                                                protein esterification +
                                                                protein flavinylation
                                                                protein glucuronidation +
                                                                protein glutathionylation +
                                                                protein glycosylation +
                                                                protein halogenation +
                                                                protein hydroxylation +
                                                                protein initiator methionine removal +
                                                                protein lipidation +
                                                                protein modification by small protein conjugation or removal +
                                                                protein nitrosylation +
                                                                protein nucleotidylation +
                                                                protein oxidation +
                                                                protein phosphopantetheinylation +
                                                                protein phosphorylation +
                                                                protein polyamination +
                                                                protein polyglycylation
                                                                protein prenylation +
                                                                protein sulfation +
                                                                protein sulfhydration +
                                                                protein tyrosinylation +
                                                                protein-chromophore linkage +
                                                                protein-cofactor linkage +
                                                                protein-tetrapyrrole linkage +
                                                                regulation of protein modification process +
                                                                sulfur incorporation into metallo-sulfur cluster
                                                                trans-translation-dependent protein tagging
                                                        protein modification process in other organism +

---

Gene_Ontology
        biological_process
                metabolic process
                        primary metabolic process
                                protein metabolic process
                                        cellular protein metabolic process
                                                CAAX-box protein maturation +
                                                cellular protein catabolic process +
                                                cellular protein modification process [GO:0006464] (2322 genes, 4858 annotations)
                                                        actin modification +
                                                        attachment of GPI anchor to protein
                                                        charged-tRNA amino acid modification +
                                                        co-translational protein modification +
                                                        enzyme active site formation +
                                                        formation of oxidatively modified proteins involved in replicative cell aging
                                                        histone modification +
                                                        ISG15-protein conjugation
                                                        metal incorporation into metallo-molybdopterin complex +
                                                        metal incorporation into metallo-oxygen cluster +
                                                        metal incorporation into metallo-sulfur cluster +
                                                        N-terminal protein amino acid modification +
                                                        negative regulation of protein modification process +
                                                        nucleic acid-protein covalent cross-linking +
                                                        peptide cross-linking +
                                                        peptidyl-amino acid modification +
                                                        positive regulation of protein modification process +
                                                        post-translational protein modification +
                                                        protein acylation +
                                                        protein alkylation +
                                                        protein amidation +
                                                        protein arginylation
                                                        protein biotinylation +
                                                        protein carbamoylation +
                                                        protein carboxylation +
                                                        protein de-ADP-ribosylation
                                                        protein deacylation +
                                                        protein dealkylation +
                                                        protein deamination +
                                                        protein deglutathionylation
                                                        protein deglycosylation +
                                                        protein dehydration +
                                                        protein delipidation
                                                        protein denucleotidylation +
                                                        protein dephosphorylation +
                                                        protein desulfurization
                                                        protein esterification +
                                                        protein flavinylation
                                                        protein glucuronidation +
                                                        protein glutathionylation +
                                                        protein glycosylation +
                                                        protein halogenation +
                                                        protein hydroxylation +
                                                        protein initiator methionine removal +
                                                        protein lipidation +
                                                        protein modification by small protein conjugation or removal +
                                                        protein nitrosylation +
                                                        protein nucleotidylation +
                                                        protein oxidation +
                                                        protein phosphopantetheinylation +
                                                        protein phosphorylation +
                                                        protein polyamination +
                                                        protein polyglycylation
                                                        protein prenylation +
                                                        protein sulfation +
                                                        protein sulfhydration +
                                                        protein tyrosinylation +
                                                        protein-chromophore linkage +
                                                        protein-cofactor linkage +
                                                        protein-tetrapyrrole linkage +
                                                        regulation of protein modification process +
                                                        sulfur incorporation into metallo-sulfur cluster
                                                        trans-translation-dependent protein tagging
                                                ferredoxin metabolic process +
                                                mitochondrial protein processing +
                                                negative regulation of cellular protein metabolic process +
                                                Notch receptor processing +
                                                positive regulation of cellular protein metabolic process +
                                                prosthetic group metabolic process +
                                                protein folding +
                                                protein repair +
                                                protein unfolding
                                                regulation of cellular protein metabolic process +
                                                rhodopsin metabolic process +
                                                signal peptide processing +
                                                sterol regulatory element binding protein cleavage +
                                                translation +
                                                vacuolar protein processing

---

Gene_Ontology
        biological_process
                metabolic process
                        primary metabolic process
                                protein metabolic process
                                        protein modification process
                                                cellular protein modification process [GO:0006464] (2322 genes, 4858 annotations)
                                                        actin modification +
                                                        attachment of GPI anchor to protein
                                                        charged-tRNA amino acid modification +
                                                        co-translational protein modification +
                                                        enzyme active site formation +
                                                        formation of oxidatively modified proteins involved in replicative cell aging
                                                        histone modification +
                                                        ISG15-protein conjugation
                                                        metal incorporation into metallo-molybdopterin complex +
                                                        metal incorporation into metallo-oxygen cluster +
                                                        metal incorporation into metallo-sulfur cluster +
                                                        N-terminal protein amino acid modification +
                                                        negative regulation of protein modification process +
                                                        nucleic acid-protein covalent cross-linking +
                                                        peptide cross-linking +
                                                        peptidyl-amino acid modification +
                                                        positive regulation of protein modification process +
                                                        post-translational protein modification +
                                                        protein acylation +
                                                        protein alkylation +
                                                        protein amidation +
                                                        protein arginylation
                                                        protein biotinylation +
                                                        protein carbamoylation +
                                                        protein carboxylation +
                                                        protein de-ADP-ribosylation
                                                        protein deacylation +
                                                        protein dealkylation +
                                                        protein deamination +
                                                        protein deglutathionylation
                                                        protein deglycosylation +
                                                        protein dehydration +
                                                        protein delipidation
                                                        protein denucleotidylation +
                                                        protein dephosphorylation +
                                                        protein desulfurization
                                                        protein esterification +
                                                        protein flavinylation
                                                        protein glucuronidation +
                                                        protein glutathionylation +
                                                        protein glycosylation +
                                                        protein halogenation +
                                                        protein hydroxylation +
                                                        protein initiator methionine removal +
                                                        protein lipidation +
                                                        protein modification by small protein conjugation or removal +
                                                        protein nitrosylation +
                                                        protein nucleotidylation +
                                                        protein oxidation +
                                                        protein phosphopantetheinylation +
                                                        protein phosphorylation +
                                                        protein polyamination +
                                                        protein polyglycylation
                                                        protein prenylation +
                                                        protein sulfation +
                                                        protein sulfhydration +
                                                        protein tyrosinylation +
                                                        protein-chromophore linkage +
                                                        protein-cofactor linkage +
                                                        protein-tetrapyrrole linkage +
                                                        regulation of protein modification process +
                                                        sulfur incorporation into metallo-sulfur cluster
                                                        trans-translation-dependent protein tagging
                                                protein modification process in other organism +

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