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MTF#680 Probe Detail
Nucleotide
Probe/Clone
  • Name
    MTF#680
  • Sequence Type
    cDNA
  • ID
    MGI:3506365
  • Region Covered
    Nucleotides 481-1170 of GenBank Accession ID Y07688.
  • Vector Type
    Plasmid
  • Insert Size
    0.689kb
  • Note
    The source of the material used to create this cDNA probe was different than that used to create the GenBank sequence record. Fragment was generated by PCR with primers AGTGAAGGACGAGCTGCTGG and CACTGTCGTCGATGGACTTGG. Template sequence provided by Paul Gray:
    GNTGCTCGAGCGGCCGCCAGTGTGATGGATATCTGCAGAATTCGGCTTAGTGAAGGACGA
    GCTGCTGGGCGAGAAGCCTGAGATCAAGCAGAAGTGGGCATCCCGGCTGTTGGCCAAGCT
    GCGCAAAGACATCCGGCCCGAGTTCCGCGAGGACTTTGTGCTAACCATCACGGGCAAGAA
    GCCCCCCTGCTGCGTGCTTTCCAACCCCGACCAGAAGGGCAAGATCCGGCGGATTGACTG
    CCTGCGCCAGGCTGACAAGGTGTGGCGGCTGGACCTGGTCATGGTGATTTTGTTTAAAGG
    GATCCCTTTGGAAAGTACTGATGGGGAGCGGCTCTACAAGTCGCCCCAGTGCTCGAACCC
    CGGCCTGTGTGTCCAGCCACATCACATTGGAGTCACAATCAAAGAACTGGACCTTTATCT
    GGCTTACTTTGTCCACACTCCGGAATCCGGACAATCAGATAGTTCAAACCAGCAAGGAGA
    TGCGGACATCAAACCACTGCCCAACGGGCACTTAAGTTTCCAGGACTGCTTTGTGACGTC
    TGGGGTCTGGAATGTGACAGAGCTGGTGAGAGTATCACAGACTCCAGTTGCGACTGCATC
    ANGGCCCAACTTCTCACTGGCGGACCTGGAGAGCCCCAGCTACTACAACATAAATCAAGT
    GACCCCTGGGAAGGCGGTCCATCACCTCCCCTCCTTNCACCAGCAGCACCAAGCGCCCCA
    AGTCCATCGACGACAGTGAAGCCGAATTCCNGCANACTGGGGGCCGTTACTAGTGGATCC
    GAGCTCGGNACCAAGCTTGATGCATANCNTGGANTATTCTNNAGGNGNCNCCTAAATAGC
    TTGGGGGTAATCATGGGCCANAACTGNTTNCNNNNNGGAAATTGTTATCCNCTCCCCANT
    TCCCNCAAAANNACGANCCGGNAAANNAAAANGNTAAAGCCCGGGGGGGCCNNNTGGGNG
    GNCCNANCCCCNNTTANTTGGGGTGGGCCNNCNNGNCCNCTTTTCCAGTNGGGAAAACTG
    TT
  • Synonyms
    GUDMAP:5685 probe, GUDMAP:12636 probe, GUDMAP:12637 probe, maprobe:396
Source
  • Species
    mouse, laboratory
  • Strain
    C57BL
  • Age
    embryonic day 13.5
  • Tissue
    brain
Genes
Nfix nuclear factor I/X
Expression
  • Assay Results
    70
Sequences
Y07688 (GenBank | EMBL | ENA | DDBJ | MGI Sequence Detail)
References
J:91257 Gray PA, et al., Mouse Brain Organization Revealed Through Direct Genome-Scale TF Expression Analysis. Science. 2004 Dec 24;306(5705):2255-2257
J:171409 GUDMAP Consortium, GUDMAP: the GenitoUrinary Development Molecular Anatomy Project. www.gudmap.org. 2004;
J:152838 Fu H, et al., A genome-wide screen for spatially restricted expression patterns identifies transcription factors that regulate glial development. J Neurosci. 2009 Sep 9;29(36):11399-408
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Funding Information
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04/16/2024
MGI 6.23 		The Jackson Laboratory