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5' flanking probe Probe Detail
Nucleotide
Probe/Clone
  • Name
    5' flanking probe
  • Sequence Type
    genomic
  • ID
    MGI:16921
  • Region Covered
    encodes sequence located 2.6 kb 5' of H-2K
  • Insert Site
    BamHI
  • Insert Size
    0.6 kb
Source
  • Species
    mouse, laboratory
Genes
H2-K1 histocompatibility 2, K1, K region
H2-K2 histocompatibility 2, K region locus 2
H2-Q10 histocompatibility 2, Q region locus 10
H2-Q5 histocompatibility 2, Q region locus 5
Polymorphisms
J:7562 Weiss EH, et al., Nature. 1984 Aug 23-29;310(5979):650-5
Endonuclease Gene Allele Fragments Strains
HindIII H2-K1 a 3.4kb B6.K1, B6.K2, B10.A-H2i5/(R5)SgSn, B10.D2-H2i7/(107R)EgJ, C57BL/10
b absent A, AKR, B10.A-H2h2/(2R), D2.GD-H2g2, DBA/2
HindIII H2-K2 a 6.6kb B6.K1, B6.K2, B10.A-H2i5/(R5)SgSn, B10.D2-H2i7/(107R)EgJ, C57BL/10
b absent A, AKR, B10.A-H2h2/(2R), D2.GD-H2g2, DBA/2
HindIII H2-Q5 a 2.4kb A, B6.K2, B10.A-H2h2/(2R), B10.A-H2i5/(R5)SgSn, B10.D2-H2i7/(107R)EgJ, C57BL/10, D2.GD-H2g2, DBA/2
b absent AKR, B6.K1
HindIII H2-Q7 a 2.7kb B6.K2, B10.A-H2h2/(2R), C57BL/10, D2.GD-H2g2
b absent A, AKR, B6.K1, B10.A-H2i5/(R5)SgSn, B10.D2-H2i7/(107R)EgJ, DBA/2
HindIII H2-Q9 a 2.7kb B6.K2, B10.A-H2h2/(2R), C57BL/10, D2.GD-H2g2
b absent A, AKR, B6.K1, B10.A-H2i5/(R5)SgSn, B10.D2-H2i7/(107R)EgJ, DBA/2
References
J:7562 Weiss EH, et al., Organization and evolution of the class I gene family in the major histocompatibility complex of the C57BL/10 mouse. Nature. 1984 Aug 23-29;310(5979):650-5
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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04/09/2024
MGI 6.23 		The Jackson Laboratory