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Molecular Resources | Mouse Resources | Miscellaneous Useful Tools | Mammals and Model Organisms

Molecular Resources

BACs

BACPAC Resources Center (BPRC) at Children's Hospital Oakland Research Institute (CHORI)

BAC/PAC products at Invitrogen

IMAGE clones

Integrated Molecular Analysis of Genome Expression (IMAGE) Consortium

Distributors of IMAGE clones

MGC clones

Mammalian Gene Collection (MGC) Project

Distributors of MGC clones

Mouse Resources

Find Mice

International Mouse Strain Resources (IMSR): database of inbred, mutant, and genetically engineered mice and ES cell lines available globally. See list of worldwide participating repositories.

Commercial vendors: Charles River Laboratories, Inc., Taconic, Harlan Sprague Dawley, Inc.

Colony Management

JAX Colony Management System (JAX-CMS): a multi-user relational database management system for managing animal colonies in a research environment (USA)

MausDB: an Open-Source mouse house and phenotyping result management system (Germany)

MUSDB: Mutagenesis Universal Support DataBase (Japan)

Commercial vendors: Big Bench Software, Locus Technology, Inc., Scionics Computer Innovation GmbH

Miscellaneous Useful Tools

Ear punch codes: standard pattern for ear punch numbering in mice
G-banded Mouse Karyotype Image (University of Washington)
Mouse Electronic Bulletin Board at MGI

Mammals / Model Organism Sites

Human:

Human Genome Variation Society (HGVS): human variation databases and links

Human Gene Mutation Database (HGMD): published gene lesions responsible for human inherited disease

Online Mendelian Inheritance in Man (OMIM) - catalog of human genes and genetic disorders

Model Organisms:

Arabidopsis - TAIR: The Arabidopsis Information Resource

C. elegans: genetics and genomics
   WormBase
   Wormatlas: anatomy
   WormBook: on-line textbook

Cattle - Bovmap Database

Dog - NHGRI Dog Genome Project

Drosophila - FlyBase

Fugu - The Fugu Informatics Network

Rat - RGD: Rat Genome Database

Saccharomyces - SGD: Saccharomyces Genome Database

Zebrafish - The Zebrafish Model Organism Database

Multi-species Animal Sites:

Animal Genome Database (ArkDB) (cat, chicken, cow, deer, duck, horse, pig, quail, salmon, sea bass, sheep, turkey)

U.S. Livestock Species Genome Projects: (cattle, chicken, horse, sheep, swine, aquaculture)

Online Mendelian Inheritance in Animals (OMIA): inherited disorders and traits in 135 animals other than human and mouse