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Dppa3
Gene Detail
 Symbol
Name
ID
Dppa3
developmental pluripotency-associated 3
MGI:1920958
Synonyms 2410075G02Rik, PGC7, stella
Feature Type protein coding gene
Genetic Map
Chromosome 6
57.72 cM
Detailed Genetic Map ± 1 cM


Mapping data(1)
Sequence Map
Chr6:122626410-122630272 bp, + strand
From VEGA annotation of GRCm38

  3863 bp   ±  kb flank

VEGA Genome Browser | Ensembl Genome Browser | UCSC Browser | NCBI Map Viewer


Mouse Genome Browser
Vertebrate
homology 		Gene Tree: Dppa3
Alleles
and
phenotypes 		All alleles(35) : Targeted(5) Gene trapped(30)
 
Female mice homozygous for a disruption in this gene are infertile or have reduced fertility due to a failure in embryonic development at or before implantation.
 
Gene Ontology
(GO)
classifications 		All GO classifications: (13 annotations)
Process chromatin modification, embryonic cleavage, ...
Component cytoplasm, female pronucleus, ...
Function methylated histone residue binding, protein binding
External Resources: FuncBase
Expression Literature Summary: (40 records)
Data Summary: Results (179)    Tissues (80)    Images (68)
Theiler Stages: 1, 2, 3, 4, 5, 7, 10, 11, 12, 13, 15, 17, 19, 20, 21, 22, 23, 24, 25, 26, 28
Assay TypeResults
Immunohistochemistry 44
RNA in situ 50
Northern blot 9
RT-PCR 76
cDNA source data(48)
External Resources: Allen Institute   GEO   ArrayExpress
Molecular
reagents 		All nucleic(52) cDNA(48) Primer pair(3) Other(1)
Microarray probesets(4)
Other database
links
VEGA Gene ModelOTTMUSG00000024458 (Evidence)
Ensembl Gene ModelENSMUSG00000046323 (Evidence)
Entrez Gene73708 (Evidence)
UniGene27982
DFCITC1577694
DoTSDT.535859
Consensus CDS ProjectCCDS20500.1
International Mouse Knockout Project StatusDppa3
Sequences
Representative SequencesLengthStrain/SpeciesFlank
genomic OTTMUSG00000024458 VEGA Gene Model | MGI Sequence Detail 3863 C57BL/6J ±  kb
transcript OTTMUST00000059988 VEGA | MGI Sequence Detail 833 Not Applicable 
polypeptide OTTMUSP00000029231 VEGA | MGI Sequence Detail 150 Not Applicable 

For the selected sequences
All sequences(30) RefSeq(2) UniProt(2)
Polymorphisms SNPs(58 from dbSNP Build 128)
Protein-related
information
ResourceIDDescription
Protein Ontology PR:000006666 developmental pluripotency-associated protein 3
References (Earliest) J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
(Latest) J:191131 Chen L, et al., Primordial germ cells and gastrointestinal stromal tumors respond distinctly to a cKit overactivating allele. Hum Mol Genet. 2013 Jan 15;22(2):313-27
All references(71)
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
05/22/2013
MGI 5.13 		The Jackson Laboratory