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Lrrk2
Gene Detail
 Symbol
Name
ID
Lrrk2
leucine-rich repeat kinase 2
MGI:1913975
Synonyms 4921513O20Rik, 9330188B09Rik, cI-46, D630001M17Rik, LOC381026
Feature Type protein coding gene
Genetic Map
Chromosome 15
46.07 cM, cytoband F1
Detailed Genetic Map ± 1 cM


Mapping data(3)
Sequence Map
Chr15:91673175-91816120 bp, + strand
From VEGA annotation of GRCm38

  142946 bp   ±  kb flank

VEGA Genome Browser | Ensembl Genome Browser | UCSC Browser | NCBI Map Viewer


Mouse Genome Browser
Vertebrate
homology 		HomoloGene:18982  Vertebrate Homology Class
1 human; 1 mouse; 1 rat; 1 chimpanzee; 1 rhesus macaque; 1 cattle; 1 dog; 1 chicken; 1 zebrafish

Gene Tree: Lrrk2
Human
homologs
Human Homolog LRRK2, leucine-rich repeat kinase 2
NCBI Gene ID 120892
neXtProt AC  NX_Q5S007
Human Synonyms  AURA17, DARDARIN, PARK8, RIPK7, ROCO2
Human Chr (Location)  12q12; chr12:40618813-40763087 (+)  GRCh37.p10
Disease Associations  (1) Diseases Associated with Human LRRK2
Alleles
and
phenotypes 		All alleles(14) : Targeted(14)
 
Mice homozygous for a knock-in allele exhibit impaired response to dopamine, amphetamine, and quinpirole. Mice homozygous for one knock-out allele exhibit increased neurite growth. Mice homozygous for different knock-out alleles exhibit alopecia due to excessive grooming or kdiney atrophy.
 
Gene Ontology
(GO)
classifications 		All GO classifications: (80 annotations)
Process activation of MAPK activity, activation of MAPKK activity, ...
Component axon, cytoplasm, ...
Function ATP binding, GTPase activator activity, ...
This is a GO Consortium Reference Genome Project gene.
External Resources: FuncBase
Expression Literature Summary: (2 records)
Data Summary: Results (85)    Tissues (38)    Images (15)
Theiler Stages: 8, 10, 18, 19, 21, 23, 25, 26, 28
Assay TypeResults
Northern blot 22
Western blot 43
RT-PCR 20
cDNA source data(25)
External Resources: Allen Institute   GENSAT   GEO   ArrayExpress
Molecular
reagents 		All nucleic(28) cDNA(26) Primer pair(2)
Microarray probesets(4)
Other database
links
VEGA Gene ModelOTTMUSG00000020864 (Evidence)
Ensembl Gene ModelENSMUSG00000036273 (Evidence)
Entrez Gene66725 (Evidence)
UniGene37558
DFCITC1584532, TC1588429, TC1597475, TC1664605
DoTSDT.101366351, DT.101703599, DT.60105160, DT.91280131, DT.91413521, DT.94148775
NIA Mouse Gene IndexU043472
EC2.7.11.1
Consensus CDS ProjectCCDS37180.1
International Mouse Knockout Project StatusLrrk2
Sequences
Representative SequencesLengthStrain/SpeciesFlank
genomic OTTMUSG00000020864 VEGA Gene Model | MGI Sequence Detail 142946 C57BL/6J ±  kb
transcript OTTMUST00000049323 VEGA | MGI Sequence Detail 8275 Not Applicable 
polypeptide OTTMUSP00000022827 VEGA | MGI Sequence Detail 2527 Not Applicable 

For the selected sequences
All sequences(47) RefSeq(2) UniProt(3)
Polymorphisms SNPs(714 from dbSNP Build 128)
Protein-related
information
ResourceIDDescription
InterPro IPR002110 Ankyrin repeat
InterPro IPR020683 Ankyrin repeat-containing domain
InterPro IPR011989 Armadillo-like helical
InterPro IPR016024 Armadillo-type fold
InterPro IPR001611 Leucine-rich repeat
InterPro IPR025875 Leucine rich repeat 4
InterPro IPR013684 Mitochondrial Rho-like
InterPro IPR017441 Protein kinase, ATP binding site
InterPro IPR000719 Protein kinase, catalytic domain
InterPro IPR011009 Protein kinase-like domain
InterPro IPR020859 ROC GTPase
InterPro IPR008271 Serine/threonine-protein kinase, active site
InterPro IPR001806 Small GTPase superfamily
InterPro IPR005225 Small GTP-binding protein domain
InterPro IPR001680 WD40 repeat
InterPro IPR017986 WD40-repeat-containing domain
InterPro IPR015943 WD40/YVTN repeat-like-containing domain
Protein Ontology PR:000003033 leucine-rich repeat serine/threonine-protein kinase 2
References (Earliest) J:66308 Takahashi Y, et al., Identification of cAMP analogue inducible genes in RAW264 macrophages. Biochim Biophys Acta. 2000 Jul 24;1492(2-3):385-94
(Latest) J:193185 Cherra SJ 3rd, et al., Mutant LRRK2 elicits calcium imbalance and depletion of dendritic mitochondria in neurons. Am J Pathol. 2013 Feb;182(2):474-84
All references(70)
Other
accession IDs 		MGI:1930800, MGI:2442391, MGI:2685773
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
05/08/2013
MGI 5.13 		The Jackson Laboratory