GO Annotations Graph

• Symbol: Ubd
• Name: ubiquitin D
• ID: MGI:1344410

GO annotations

A table of the annotations represented in this image is provided below.

• Gray arrows indicate "is_a"; Blue arrows indicate "part_of"; Black arrows indicate "regulates"; Green arrows indicate "positively_regulates"; Red arrows indicate "negatively_regulates"
• Experimental annotations are indicated by darker-colored nodes; other annotations by lighter-colored nodes
• Clicking on any node links to the MGI GO browser and information on all genes annotated to the term or its subterms.
• Graph generated Fri Mar 10 20:53:16 2023.

---

Gene Ontology Evidence Code Abbreviations:

Experimental:

EXP Inferred from experiment

HMP Inferred from high throughput mutant phenotype

HGI Inferred from high throughput genetic interaction

HDA Inferred from high throughput direct assay

HEP Inferred from high throughput expression pattern

IDA Inferred from direct assay

IEP Inferred from expression pattern

IGI Inferred from genetic interaction

IMP Inferred from mutant phenotype

IPI Inferred from physical interaction

Homology:

IAS Inferred from ancestral sequence

IBA Inferred from biological aspect of ancestor

IBD Inferred from biological aspect of descendant

IKR Inferred from key residues

IMR Inferred from missing residues

IRD Inferred from rapid divergence

ISA Inferred from sequence alignment

ISM Inferred from sequence model

ISO Inferred from sequence orthology

ISS Inferred from sequence or structural similarity

Automated:

IEA Inferred from electronic annotation

RCA Reviewed computational analysis

Other:

IC Inferred by curator

NAS Non-traceable author statement

ND No biological data available

TAS Traceable author statement

---

Category	GO ID	Classification Term	Evidence	Reference
Molecular Function	GO:0070628	proteasome binding	ISO	J:164563
Molecular Function	GO:0070628	proteasome binding	IBA	J:265628
Molecular Function	GO:0005515	protein binding	IPI	J:140387
Cellular Component	GO:0016235	aggresome	ISO	J:164563
Cellular Component	GO:0005737	cytoplasm	IDA	J:163145
Cellular Component	GO:0001650	fibrillar center	ISO	J:164563
Cellular Component	GO:0005654	nucleoplasm	ISO	J:164563
Cellular Component	GO:0005634	nucleus	IDA	J:163145
Cellular Component	GO:0005634	nucleus	ISO	J:164563
Cellular Component	GO:0005634	nucleus	IBA	J:265628
Biological Process	GO:0070842	aggresome assembly	ISO	J:164563
Biological Process	GO:0043011	myeloid dendritic cell differentiation	ISO	J:164563
Biological Process	GO:0043065	positive regulation of apoptotic process	IEP	J:110321
Biological Process	GO:0043065	positive regulation of apoptotic process	ISO	J:164563
Biological Process	GO:0043065	positive regulation of apoptotic process	IMP	J:163145
Biological Process	GO:0043065	positive regulation of apoptotic process	IBA	J:265628
Biological Process	GO:0043123	positive regulation of I-kappaB kinase/NF-kappaB signaling	ISO	J:164563
Biological Process	GO:0043123	positive regulation of I-kappaB kinase/NF-kappaB signaling	IMP	J:163435
Biological Process	GO:0043123	positive regulation of I-kappaB kinase/NF-kappaB signaling	IBA	J:265628
Biological Process	GO:0032446	protein modification by small protein conjugation	IC	J:163145
Biological Process	GO:0016567	protein ubiquitination	ISO	J:164563
Biological Process	GO:0016567	protein ubiquitination	IMP	J:140387
Biological Process	GO:0016567	protein ubiquitination	IMP	J:163145
Biological Process	GO:0016567	protein ubiquitination	IBA	J:265628
Biological Process	GO:1901990	regulation of mitotic cell cycle phase transition	ISO	J:164563
Biological Process	GO:0034612	response to tumor necrosis factor	IEP	J:110321
Biological Process	GO:0034612	response to tumor necrosis factor	IBA	J:265628
Biological Process	GO:0034341	response to type II interferon	IEP	J:110321
Biological Process	GO:0034341	response to type II interferon	IBA	J:265628
Biological Process	GO:0006511	ubiquitin-dependent protein catabolic process	ISO	J:164563
Biological Process	GO:0006511	ubiquitin-dependent protein catabolic process	IMP	J:140387
Biological Process	GO:0006511	ubiquitin-dependent protein catabolic process	IMP	J:163145
Biological Process	GO:0006511	ubiquitin-dependent protein catabolic process	IBA	J:265628