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GO Annotations Graph
Symbol
Name
ID
Upf1
UPF1 regulator of nonsense transcripts homolog (yeast)
MGI:107995

GO annotations  (Text View)    (Tabular View)

A table of the annotations represented in this image is provided below.
CategoryGO IDClassification TermEvidenceReference
Molecular FunctionGO:0005524ATP bindingIEAJ:72247
Molecular FunctionGO:0005524ATP bindingIEAJ:60000
Molecular FunctionGO:0004004ATP-dependent RNA helicase activityISOJ:164563
Molecular FunctionGO:0003682chromatin bindingISOJ:164563
Molecular FunctionGO:0003677DNA bindingIEAJ:72247
Molecular FunctionGO:0004386helicase activityIEAJ:72247
Molecular FunctionGO:0004386helicase activityIEAJ:60000
Molecular FunctionGO:0016787hydrolase activityIEAJ:60000
Molecular FunctionGO:0046872metal ion bindingIEAJ:60000
Molecular FunctionGO:0000166nucleotide bindingIEAJ:60000
Molecular FunctionGO:0044822poly(A) RNA bindingISOJ:164563
Molecular FunctionGO:0003723RNA bindingIEAJ:60000
Molecular FunctionGO:0042162telomeric DNA bindingISOJ:164563
Molecular FunctionGO:0008270zinc ion bindingIEAJ:72247
Cellular ComponentGO:0000785chromatinISOJ:164563
Cellular ComponentGO:0005737cytoplasmIEAJ:60000
Cellular ComponentGO:0005737cytoplasmIEAJ:72247
Cellular ComponentGO:0035145exon-exon junction complexISOJ:164563
Cellular ComponentGO:0000784nuclear chromosome, telomeric regionISOJ:164563
Cellular ComponentGO:0005654nucleoplasmISOJ:164563
Cellular ComponentGO:0005634nucleusISOJ:164563
Cellular ComponentGO:0044530supraspliceosomal complexISOJ:164563
Biological ProcessGO:00611583'-UTR-mediated mRNA destabilizationISOJ:164563
Biological ProcessGO:0071347cellular response to interleukin-1ISOJ:164563
Biological ProcessGO:0071222cellular response to lipopolysaccharideISOJ:164563
Biological ProcessGO:0006281DNA repairISOJ:164563
Biological ProcessGO:0006260DNA replicationISOJ:164563
Biological ProcessGO:0009048dosage compensation by inactivation of X chromosomeIMPJ:116433
Biological ProcessGO:0071044histone mRNA catabolic processISOJ:164563
Biological ProcessGO:0000956nuclear-transcribed mRNA catabolic processISOJ:164563
Biological ProcessGO:0000294nuclear-transcribed mRNA catabolic process, endonucleolytic cleavage-dependent decayISOJ:164563
Biological ProcessGO:0000184nuclear-transcribed mRNA catabolic process, nonsense-mediated decayISOJ:164563
Biological ProcessGO:0061014positive regulation of mRNA catabolic processISOJ:164563
Biological ProcessGO:0006449regulation of translational terminationISOJ:164563
Biological ProcessGO:0000723telomere maintenanceISOJ:164563
Biological ProcessGO:0032201telomere maintenance via semi-conservative replicationISOJ:164563


Gene Ontology Evidence Code Abbreviations:

Experimental:
EXP
Inferred from experiment
HMP
Inferred from high throughput mutant phenotype
HGI
Inferred from high throughput genetic interaction
HDA
Inferred from high throughput direct assay
HEP
Inferred from high throughput expression pattern
IDA
Inferred from direct assay
IEP
Inferred from expression pattern
IGI
Inferred from genetic interaction
IMP
Inferred from mutant phenotype
IPI
Inferred from physical interaction
Homology:
IAS
Inferred from ancestral sequence
IBA
Inferred from biological aspect of ancestor
IBD
Inferred from biological aspect of descendant
IKR
Inferred from key residues
IMR
Inferred from missing residues
IRD
Inferred from rapid divergence
ISA
Inferred from sequence alignment
ISM
Inferred from sequence model
ISO
Inferred from sequence orthology
ISS
Inferred from sequence or structural similarity
Automated:
IEA
Inferred from electronic annotation
RCA
Reviewed computational analysis
Other:
IC
Inferred by curator
NAS
Non-traceable author statement
ND
No biological data available
TAS
Traceable author statement


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
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last database update
10/12/2021
MGI 6.17
The Jackson Laboratory