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H1f0
Gene Detail
 Symbol
Name
ID
H1f0
H1 histone family, member 0
MGI:95893
Synonyms D130017D06Rik, H1fv
Feature Type protein coding gene
Genetic Map
Chromosome 15
37.70 cM
Detailed Genetic Map ± 1 cM


Mapping data(7)
Sequence Map
Chr15:79028212-79030498 bp, + strand
From Ensembl annotation of GRCm38

  2287 bp   ±  kb flank

VEGA Genome Browser | Ensembl Genome Browser | UCSC Browser | NCBI Map Viewer


Mouse Genome Browser
Vertebrate
homology
HomoloGene:129527  Vertebrate Homology Class
1 human; 1 mouse; 1 rat; 1 chimpanzee; 1 rhesus macaque; 1 cattle; 1 dog; 1 zebrafish

Protein SuperFamily: histone H1
Gene Tree: H1f0

Human
homologs
Human Homolog H1F0, H1 histone family, member 0
NCBI Gene ID 3005
neXtProt AC  NX_P07305
Human Synonyms  H10, H1FV
Human Chr (Location)  22q13.1; chr22:37805107-37807436 (+)  GRCh38
Alleles
and
phenotypes
All alleles(2) : Targeted(1) Gene trapped(1)
 
Mice homozygous for a knock-out allele are viable, fertile and overtly normal with no apparent anatomic or histologic abnormalities or defects in cell division patterns.
 
Gene Ontology
(GO)
classifications
All GO classifications: (11 annotations)
Process nucleosome assembly
Component actin cytoskeleton, chromosome, ...
Function DNA binding, poly(A) RNA binding
External Resources: FuncBase
Expression
Literature Summary: (4 records)
Data Summary: Results (18)    Tissues (12)    Images (1)
Theiler Stages: 1, 2, 3, 4, 23, 28
Assay TypeResults
Immunohistochemistry 5
RNA in situ 1
RT-PCR 12
cDNA source data(18)
External Resources: Allen Institute   GEO   ArrayExpress
Molecular
reagents
All nucleic(23) Genomic(3) cDNA(18) Primer pair(2)
Microarray probesets(4)
Other database
links
Ensembl Gene ModelENSMUSG00000096210 (Evidence)
Entrez Gene14958 (Evidence)
DFCITC1573923, TC1608006
Consensus CDS ProjectCCDS56990.1
International Mouse Knockout Project StatusH1f0
Sequences
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000096210 Ensembl Gene Model | MGI Sequence Detail 2287 C57BL/6J ±  kb
transcript ENSMUST00000180086 Ensembl | MGI Sequence Detail 2287 Not Applicable 
polypeptide ENSMUSP00000137309 Ensembl | MGI Sequence Detail 194 Not Applicable 

For the selected sequences
All sequences(35) RefSeq(2) UniProt(4)
Polymorphisms PCR(1) : SNPs within 2kb(3 from dbSNP Build 137)
Protein-related
information
ResourceIDDescription
InterPro IPR005818 Histone H1/H5
InterPro IPR005819 Histone H5
InterPro IPR013783 Immunoglobulin-like fold
InterPro IPR013768 Intercellular adhesion molecule, N-terminal
InterPro IPR011991 Winged helix-turn-helix DNA-binding domain
Protein Ontology PR:000008405 histone H1.0
References (Earliest) J:16829 Alonso A, et al., Early increase in histone H1(0) mRNA during differentiation of F9 cells to parietal endoderm. EMBO J. 1988 Oct;7(10):3003-8
(Latest) J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582
All references(51)
Other
accession IDs
MGD-MRK-10488, MGI:2444656

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
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last database update
04/08/2014
MGI 5.17
The Jackson Laboratory