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Serpina1c Gene Detail
Summary
  • Symbol
    Serpina1c
  • Name
    serine (or cysteine) peptidase inhibitor, clade A, member 1C
  • Synonyms
    PI3, PI6, Spi1-3, Spi1-6
  • Feature Type
    protein coding gene
  • IDs
    MGI:891969
    NCBI Gene: 20702
  • Gene Overview
    MyGene.info: SERPINA1
  • Alliance
  • Transcription Start Sites
    2 TSS
Location &
Maps
more
  • Sequence Map
    Chr12:103894926-103904887 bp, - strand
  • From Ensembl annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 12, 52.98 cM
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    103 from dbSNP Build 142
  • Strain Annotations
    9
  • RFLP
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_891969
protein coding gene Chr12:103894926-103904950 (-)
129S1/SvImJ MGP_129S1SvImJ_G0020062
protein coding gene Chr12:105685371-105696120 (-)
A/J no annotation
AKR/J MGP_AKRJ_G0019991
protein coding gene Chr12:104455916-104482223 (-)
BALB/cJ MGP_BALBcJ_G0019999
protein coding gene Chr12:101751591-101762197 (-)
C3H/HeJ MGP_C3HHeJ_G0019802
protein coding gene Chr12:104736136-104747612 (-)
C57BL/6NJ no annotation
CAROLI/EiJ MGP_CAROLIEiJ_G0018061
protein coding gene Chr12:98377689-98387679 (-)
CAST/EiJ no annotation
CBA/J no annotation
DBA/2J MGP_DBA2J_G0019886
protein coding gene Chr12:101034783-101037547 (-)
FVB/NJ no annotation
LP/J no annotation
NOD/ShiLtJ no annotation
NZO/HlLtJ no annotation
PWK/PhJ no annotation
SPRET/EiJ MGP_SPRETEiJ_G0018908
protein coding gene Chr12:98178567-98191014 (-)
WSB/EiJ MGP_WSBEiJ_G0019403
protein coding gene Chr12:104662483-104673090 (-)



Homology
more
  • Human Ortholog
    SERPINA1, serpin family A member 1
  • Vertebrate Orthologs
    20
  • Human Ortholog
    SERPINA1, serpin family A member 1
    Orthology source: HomoloGene, HGNC
  • Synonyms
    A1A, A1AT, AAT, alpha1AT, nNIF, PI, PI1, PRO2275
  • Links
    NCBI Gene ID: 5265
    neXtProt AC: NX_P01009
    UniProt: P01009

  • Chr Location
    14q32.13; chr14:94376747-94390692 (-)  GRCh38.p7

Human Diseases
more
  • Diseases
    2 with human SERPINA1 associations

Human Disease Mouse Models
      
IDs
IDs
Click on a disease name to see all genes associated with that disease.

Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    2 phenotype references
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
  • GO References
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell death
cell differentiation
cell population proliferation
cellular component organization
establishment of localization
homeostatic process
immune system process
lipid metabolic process
nucleic acid-templated transcription
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
  • Tissues
  • cDNA Data
  • Literature Summary
Interactions
less
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000079015 Ensembl Gene Model | MGI Sequence Detail 9962 C57BL/6J ±  kb
transcript ENSMUST00000074051 Ensembl | MGI Sequence Detail 1361 Not Applicable  
polypeptide ENSMUSP00000073695 Ensembl | MGI Sequence Detail 413 Not Applicable  
For the selected sequence
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 11
    Genomic 1
    cDNA 10

    Microarray probesets 4
Other
Accession IDs
less
MGI:891966
References
more
  • Summaries
    All 33
    Developmental Gene Expression 2
    Gene Ontology 6
    Phenotypes 2
  • Earliest
    J:19360 Hill RE, et al., Plasma protease inhibitors in mouse and man: divergence within the reactive centre regions. Nature. 1984 Sep 13-19;311(5982):175-7
  • Latest
    J:265628 Gaudet P, et al., Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Brief Bioinform. 2011 Sep;12(5):449-62

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
04/09/2019
MGI 6.13
The Jackson Laboratory