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Gm38093 Gene Detail
Summary
  • Symbol
    Gm38093
  • Name
    predicted gene, 38093
  • Feature Type
    lncRNA gene
  • IDs
    MGI:5611321
  • Alliance
Location &
Maps
more
  • Sequence Map
    Chr1:185477000-185489969 bp, + strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
  • Genetic Map
    Chromosome 1, Syntenic
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    250 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_5611321
lncRNA gene Chr1:185477000-185489969 (+)
129S1/SvImJ MGP_129S1SvImJ_G0005073
lincRNA gene Chr1:192474674-192490610 (+)
A/J MGP_AJ_G0005056
lincRNA gene Chr1:184615237-184628320 (+)
AKR/J MGP_AKRJ_G0005034
lincRNA gene Chr1:190071752-190084617 (+)
BALB/cJ MGP_BALBcJ_G0005037
lincRNA gene Chr1:185255941-185271819 (+)
C3H/HeJ MGP_C3HHeJ_G0004986
lincRNA gene Chr1:190929611-190943807 (+)
C57BL/6NJ MGP_C57BL6NJ_G0005187
lincRNA gene Chr1:198633008-198645773 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0004594
lincRNA gene Chr1:175600327-175614828 (+)
CAST/EiJ MGP_CASTEiJ_G0004933
lincRNA gene Chr1:190369248-190382066 (+)
CBA/J MGP_CBAJ_G0004976
lincRNA gene Chr1:206033266-206047867 (+)
DBA/2J MGP_DBA2J_G0004995
lincRNA gene Chr1:183376527-183389591 (+)
FVB/NJ MGP_FVBNJ_G0005016
lincRNA gene Chr1:181474489-181487226 (+)
LP/J MGP_LPJ_G0005074
lincRNA gene Chr1:193644841-193658981 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0004999
lincRNA gene Chr1:212896977-212915693 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0005194
lincRNA gene Chr1:189930510-189944877 (+)
PWK/PhJ MGP_PWKPhJ_G0004884
lincRNA gene Chr1:182586854-182599909 (+)
SPRET/EiJ MGP_SPRETEiJ_G0004809
lincRNA gene Chr1:188884623-188900400 (+)
WSB/EiJ MGP_WSBEiJ_G0004980
lincRNA gene Chr1:190095069-190109247 (+)



Homology
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Expression
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Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
Sequences &
Gene Models
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  • All Sequences
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000103799 Ensembl Gene Model | MGI Sequence Detail 12970 C57BL/6J ±  kb
transcript ENSMUST00000195210 Ensembl | MGI Sequence Detail 710 Not Applicable  
For the selected sequence
References
more
  • Summaries
    All 1
  • Earliest
    J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Funding Information
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last database update
03/12/2024
MGI 6.23
The Jackson Laboratory