Gm29747 Pseudogene Detail

Summary

• Symbol
  Gm29747
• Name
  predicted gene, 29747

• Feature Type
  pseudogene
• IDs
  MGI:5588906
  NCBI Gene: 101055938
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr3:7958395-7958979 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 3, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  65 from dbSNP Build 142
• Strain Annotations
  17

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5588906	pseudogene	Chr3:7958395-7959040 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0012010	pseudogene	Chr3:4708169-4708753 (+)
A/J	MGP_AJ_G0012001	pseudogene	Chr3:4984673-4985257 (+)
AKR/J	MGP_AKRJ_G0011961	pseudogene	Chr3:4799557-4800141 (+)
BALB/cJ	MGP_BALBcJ_G0011979	pseudogene	Chr3:4717546-4718130 (+)
C3H/HeJ	MGP_C3HHeJ_G0011855	pseudogene	Chr3:5083556-5084140 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0012284	pseudogene	Chr3:5279392-5279976 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	MGP_CASTEiJ_G0011639	pseudogene	Chr3:5088696-5089281 (+)
CBA/J	MGP_CBAJ_G0011829	pseudogene	Chr3:5119424-5120008 (+)
DBA/2J	MGP_DBA2J_G0011884	pseudogene	Chr3:4588209-4588795 (+)
FVB/NJ	MGP_FVBNJ_G0011891	pseudogene	Chr3:4439590-4440176 (+)
LP/J	MGP_LPJ_G0011957	pseudogene	Chr3:5217202-5217786 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0011893	pseudogene	Chr3:6193090-6193676 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0012291	pseudogene	Chr3:4653301-4653887 (+)
PWK/PhJ	MGP_PWKPhJ_G0011487	pseudogene	Chr3:4744375-4744961 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0011301	pseudogene	Chr3:4773812-4774397 (+)
WSB/EiJ	MGP_WSBEiJ_G0011660	pseudogene	Chr3:4681551-4682135 (+)

Homology

• Gene Tree
  Gm29747
  

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00000103399 (Evidence)
• NCBI Gene
  101055938

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000103399	Ensembl Gene Model | MGI Sequence Detail	585	C57BL/6J
transcript	ENSMUST00000194764	Ensembl | MGI Sequence Detail	585	Not Applicable

References

• Summaries
  All 3
• Earliest
  J:63103 Mouse Genome Database and National Center for Biotechnology Information, Entrez Gene Load. Database Release. 2000;
• Latest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;