Peak1os Gene Detail

Summary

• Symbol
  Peak1os
• Name
  pseudopodium-enriched atypical kinase 1, opposite strand
• Synonyms
  Gm26589

• Feature Type
  antisense lncRNA gene
  BioType Conflict
  
• IDs
  MGI:5477083
  NCBI Gene: 102633516
• Alliance
  gene page
• Transcription Start Sites
  1 TSS

Location &
Maps

• Sequence Map
  Chr9:56165174-56175064 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 9, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  33 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5477083	antisense lncRNA gene	Chr9:56148628-56232426 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0004631	antisense lncRNA gene	Chr9:55399881-55410421 (+)
A/J	MGP_AJ_G0004612	antisense lncRNA gene	Chr9:53601741-53611631 (+)
AKR/J	MGP_AKRJ_G0004595	antisense lncRNA gene	Chr9:54848895-54859380 (+)
BALB/cJ	MGP_BALBcJ_G0004596	antisense lncRNA gene	Chr9:53390047-53399937 (+)
C3H/HeJ	MGP_C3HHeJ_G0004545	antisense lncRNA gene	Chr9:55309534-55323055 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0004746	antisense lncRNA gene	Chr9:56959372-56970307 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0004197	antisense lncRNA gene	Chr9:52952571-52962414 (+)
CAST/EiJ	MGP_CASTEiJ_G0004503	antisense lncRNA gene	Chr9:55352734-55362669 (+)
CBA/J	MGP_CBAJ_G0004539	antisense lncRNA gene	Chr9:58913444-58927593 (+)
DBA/2J	MGP_DBA2J_G0004554	antisense lncRNA gene	Chr9:53496335-53506225 (+)
FVB/NJ	MGP_FVBNJ_G0004572	antisense lncRNA gene	Chr9:52693569-52704728 (+)
LP/J	MGP_LPJ_G0004635	antisense lncRNA gene	Chr9:55683633-55693996 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0004560	antisense lncRNA gene	Chr9:60433391-60444744 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0004745	antisense lncRNA gene	Chr9:54849905-54861179 (+)
PWK/PhJ	MGP_PWKPhJ_G0004456	antisense lncRNA gene	Chr9:53501633-53511522 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0004396	antisense lncRNA gene	Chr9:55132235-55142139 (+)
WSB/EiJ	MGP_WSBEiJ_G0004544	antisense lncRNA gene	Chr9:54783163-54793516 (+)

Homology

• Gene Tree
  Peak1os
  

Expression

• Assay Results
  706
• cDNA Data
  1

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  31
• RefSeq
  9

• Ensembl
  ENSMUSG00000097111 (Evidence)
• NCBI Gene
  102633516

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000097111	Ensembl Gene Model | MGI Sequence Detail	9891	C57BL/6J
transcript	ENSMUST00000181444	Ensembl | MGI Sequence Detail	1264	Not Applicable

Molecular
Reagents

• All nucleic 1

  cDNA 1

References

• Summaries
  All 5
• Earliest
  J:23000 MGD Nomenclature Committee, Nomenclature Committee Use. 1995-02-14;
• Latest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;

TSS for Peak1os:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr85251	Chr9:56164763-56164801 (+)	-392 bp