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Mir5627 Gene Detail
Summary
  • Symbol
    Mir5627
  • Name
    microRNA 5627
  • Synonyms
    mmu-mir-5627
Location &
Maps
more
  • Sequence Map
    Chr12:44257096-44257156 bp, + strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
  • Genetic Map
    Chromosome 12, Syntenic
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    7 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_5453461
miRNA gene Chr12:44257096-44257156 (+)
129S1/SvImJ MGP_129S1SvImJ_G0007921
miRNA gene Chr12:42777487-42777547 (+)
A/J MGP_AJ_G0007914
miRNA gene Chr12:41256808-41256868 (+)
AKR/J MGP_AKRJ_G0007890
miRNA gene Chr12:42574726-42574786 (+)
BALB/cJ MGP_BALBcJ_G0007894
miRNA gene Chr12:41553839-41553899 (+)
C3H/HeJ MGP_C3HHeJ_G0007839
miRNA gene Chr12:42542030-42542090 (+)
C57BL/6NJ MGP_C57BL6NJ_G0008076
miRNA gene Chr12:44045829-44045889 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0007207
miRNA gene Chr12:40273403-40273463 (+)
CAST/EiJ MGP_CASTEiJ_G0007732
miRNA gene Chr12:37701998-37702058 (+)
CBA/J MGP_CBAJ_G0007811
miRNA gene Chr12:45511545-45511605 (+)
DBA/2J MGP_DBA2J_G0007847
miRNA gene Chr12:41142272-41142332 (+)
FVB/NJ MGP_FVBNJ_G0007865
miRNA gene Chr12:40666553-40666613 (+)
LP/J MGP_LPJ_G0007925
miRNA gene Chr12:42745994-42746054 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0007836
miRNA gene Chr12:46202895-46202955 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0008069
miRNA gene Chr12:42157504-42157564 (+)
PWK/PhJ MGP_PWKPhJ_G0007657
miRNA gene Chr12:35810942-35811002 (+)
SPRET/EiJ MGP_SPRETEiJ_G0007552
miRNA gene Chr12:36757412-36757472 (+)
WSB/EiJ MGP_WSBEiJ_G0007801
miRNA gene Chr12:42460891-42460951 (+)



Homology
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Expression
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Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
Sequences &
Gene Models
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  • All Sequences
  • RefSeq
Representative SequencesLengthStrain/SpeciesFlank
genomic 100885842 NCBI Gene Model | MGI Sequence Detail 61 C57BL/6J ±  kb
transcript NR_049203 RefSeq | MGI Sequence Detail 61 ZRU/MplStud  
For the selected sequence
Other Database
Links
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miRBase MI0019198
References
more
  • Summaries
    All 4
  • Earliest
    J:105741 Griffiths-Jones S, et al., miRBase: microRNA sequences, targets and gene nomenclature. Nucleic Acids Res. 2006 Jan 1;34(Database issue):D140-4

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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last database update
03/19/2024
MGI 6.23
The Jackson Laboratory