Gm22590 Gene Detail

Summary

• Symbol
  Gm22590
• Name
  predicted gene, 22590

• Feature Type
  snoRNA gene
• IDs
  MGI:5452367
  NCBI Gene: 115486097
• Alliance
  gene page

Location &
Maps

• Sequence Map
  ChrX:119921532-119921659 bp, + strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome X, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  56 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5452367	snoRNA gene	ChrX:119921532-119921659 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0039603	snoRNA gene	ChrX:117918228-117918355 (+)
A/J	MGP_AJ_G0039601	snoRNA gene	ChrX:117492105-117492232 (+)
AKR/J	MGP_AKRJ_G0039528	snoRNA gene	ChrX:121311454-121311581 (+)
BALB/cJ	MGP_BALBcJ_G0039581	snoRNA gene	ChrX:115990144-115990271 (+)
C3H/HeJ	MGP_C3HHeJ_G0039239	snoRNA gene	ChrX:118182304-118182431 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0040133	snoRNA gene	ChrX:121451615-121451742 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0036771	snoRNA gene	ChrX:113573801-113573928 (+)
CAST/EiJ	MGP_CASTEiJ_G0038366	snoRNA gene	ChrX:101898063-101898190 (+)
CBA/J	MGP_CBAJ_G0039210	snoRNA gene	ChrX:125245833-125245960 (+)
DBA/2J	MGP_DBA2J_G0039404	snoRNA gene	ChrX:116865288-116865415 (+)
FVB/NJ	MGP_FVBNJ_G0039359	snoRNA gene	ChrX:116178669-116178796 (+)
LP/J	MGP_LPJ_G0039444	snoRNA gene	ChrX:118789975-118790102 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0039360	snoRNA gene	ChrX:131436466-131436593 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0040229	snoRNA gene	ChrX:117424836-117424963 (+)
PWK/PhJ	MGP_PWKPhJ_G0038045	snoRNA gene	ChrX:99211611-99211738 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0037794	snoRNA gene	ChrX:102620523-102620650 (-)
WSB/EiJ	MGP_WSBEiJ_G0038595	snoRNA gene	ChrX:116044461-116044588 (+)

Homology

• Gene Tree
  Gm22590
  

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  22
• RefSeq
  1

• Ensembl
  ENSMUSG00000077435 (Evidence)
• NCBI Gene
  115486097

Representative Sequences			Length	Strain/Species
genomic	115486097	NCBI Gene Model | MGI Sequence Detail	128	C57BL/6J
transcript	XR_004940546	RefSeq | MGI Sequence Detail	128	C57BL/6J

References

• Summaries
  All 3
• Earliest
  J:63103 Mouse Genome Database and National Center for Biotechnology Information, Entrez Gene Load. Database Release. 2000;
• Latest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;