Gm20715 Gene Detail

Summary

• Symbol
  Gm20715
• Name
  predicted gene 20715

• Feature Type
  protein coding gene
• IDs
  MGI:5313162
• Alliance
  gene page
• Transcription Start Sites
  1 TSS

Location &
Maps

• Sequence Map
  Chr7:6413276-6444690 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 7, 3.72 cM

Strain
Comparison

• SNPs within 2kb
  223 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5313162	protein coding gene	Chr7:6413276-6444690 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0031604	protein coding gene	Chr7:3503179-3538791 (+)
A/J	MGP_AJ_G0031578	protein coding gene	Chr7:3399122-3430377 (+)
AKR/J	MGP_AKRJ_G0031507	protein coding gene	Chr7:3629260-3664964 (+)
BALB/cJ	MGP_BALBcJ_G0031586	protein coding gene	Chr7:3503677-3541395 (+)
C3H/HeJ	MGP_C3HHeJ_G0031307	protein coding gene	Chr7:3476951-3510003 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0032049	protein coding gene	Chr7:3697470-3736379 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0029163	protein coding gene	Chr7:3092824-3122347 (+)
CAST/EiJ	MGP_CASTEiJ_G0030670	protein coding gene	Chr7:3371541-3409858 (+)
CBA/J	MGP_CBAJ_G0031264	protein coding gene	Chr7:3810451-3851977 (+)
DBA/2J	MGP_DBA2J_G0031422	protein coding gene	Chr7:3421185-3454118 (+)
FVB/NJ	MGP_FVBNJ_G0031377	protein coding gene	Chr7:3420153-3451785 (+)
LP/J	MGP_LPJ_G0031508	protein coding gene	Chr7:3608893-3645050 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0031415	protein coding gene	Chr7:3806275-3842983 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0032078	protein coding gene	Chr7:3433977-3467653 (+)
PWK/PhJ	MGP_PWKPhJ_G0030397	protein coding gene	Chr7:3606835-3638972 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0030224	protein coding gene	Chr7:3009126-3044625 (+)
WSB/EiJ	MGP_WSBEiJ_G0030764	protein coding gene	Chr7:3573193-3608835 (+)

Homology

• Gene Tree
  Gm20715
  

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  22
• UniProt
  1

• Ensembl
  ENSMUSG00000045929 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000045929	Ensembl Gene Model | MGI Sequence Detail	31415	C57BL/6J
transcript	ENSMUST00000054781	Ensembl | MGI Sequence Detail	4460	Not Applicable
polypeptide	ENSMUSP00000050428	Ensembl | MGI Sequence Detail	95	Not Applicable

Protein
Information

• UniProt
  1 Sequence

References

• Summaries
  All 3
• Earliest
  J:53168 Bairoch A, et al., SWISS-PROT Annotated protein sequence database. Database Release. 1999;
• Latest
  J:109762 Mouse Genome Informatics and VEGA Genome Database Project, Collaboration to Associate VEGA (Vertebrate Genome Annotation) Mouse Gene Models with MGI Markers. Database Release. 2006;

TSS for Gm20715:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr64450	Chr7:6413217-6413228 (+)	-53 bp