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Gm17227 Gene Detail
Summary
  • Symbol
    Gm17227
  • Name
    predicted gene 17227
  • Feature Type
    lncRNA gene
  • IDs
    MGI:4938054
    NCBI Gene: 102639888
  • Alliance
  • Transcription Start Sites
    2 TSS
Location &
Maps
more
  • Sequence Map
    Chr19:7297660-7304361 bp, + strand
  • From NCBI annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 19, 5.32 cM
Strain
Comparison
more
  • SNPs within 2kb
    27 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_4938054
lncRNA gene Chr19:7297658-7304528 (+)
129S1/SvImJ MGP_129S1SvImJ_G0003471
antisense lncRNA gene Chr19:4422191-4429061 (+)
A/J MGP_AJ_G0003450
antisense lncRNA gene Chr19:4071280-4078150 (+)
AKR/J MGP_AKRJ_G0003430
antisense lncRNA gene Chr19:4201575-4208445 (+)
BALB/cJ MGP_BALBcJ_G0003439
antisense lncRNA gene Chr19:4185171-4192037 (+)
C3H/HeJ MGP_C3HHeJ_G0003388
antisense lncRNA gene Chr19:4332651-4339372 (+)
C57BL/6NJ MGP_C57BL6NJ_G0003577
antisense lncRNA gene Chr19:4511836-4518706 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0003088
antisense lncRNA gene Chr19:3976890-3983697 (+)
CAST/EiJ MGP_CASTEiJ_G0003351
antisense lncRNA gene Chr19:4235932-4242879 (+)
CBA/J MGP_CBAJ_G0003385
antisense lncRNA gene Chr19:4588837-4595703 (+)
DBA/2J MGP_DBA2J_G0003393
antisense lncRNA gene Chr19:4037242-4044126 (+)
FVB/NJ MGP_FVBNJ_G0003411
antisense lncRNA gene Chr19:4075222-4084913 (+)
LP/J MGP_LPJ_G0003465
antisense lncRNA gene Chr19:4272364-4281555 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0003399
antisense lncRNA gene Chr19:4479016-4485874 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0003580
antisense lncRNA gene Chr19:4349023-4355893 (+)
PWK/PhJ MGP_PWKPhJ_G0003307
antisense lncRNA gene Chr19:4087250-4094460 (+)
SPRET/EiJ MGP_SPRETEiJ_G0003252
antisense lncRNA gene Chr19:4151608-4158543 (+)
WSB/EiJ MGP_WSBEiJ_G0003385
antisense lncRNA gene Chr19:4249522-4256397 (+)



Homology
less
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    1 phenotype reference
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
  • cDNA Data
Interactions
less
Sequences &
Gene Models
less
  • All Sequences
  • RefSeq
Representative SequencesLengthStrain/SpeciesFlank
genomic 102639888 NCBI Gene Model | MGI Sequence Detail 6702 C57BL/6J ±  kb
transcript AK133024 GenBank | EMBL | DDBJ | MGI Sequence Detail 957 C57BL/6J  
For the selected sequence
Molecular
Reagents
less
  • All nucleic 2
    cDNA 2
References
more
  • Summaries
    All 6
    Phenotypes 1
  • Earliest
    J:63103 Mouse Genome Database and National Center for Biotechnology Information, Entrez Gene Load. Database Release. 2000;
  • Latest
    J:141210 Mouse Genome Informatics (MGI) and National Center for Biotechnology Information (NCBI), Mouse Gene Trap Data Load from dbGSS. Database Download. 2008;

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support.
last database update
03/31/2020
MGI 6.15
The Jackson Laboratory