About   Help   FAQ
Gm17590 Gene Detail
Summary
  • Symbol
    Gm17590
  • Name
    predicted gene, 17590
  • Feature Type
    lncRNA gene
  • IDs
    MGI:4937224
    NCBI Gene: 100579155
  • Alliance
  • Transcription Start Sites
    1 TSS
Location &
Maps
more
  • Sequence Map
    Chr5:3522861-3530873 bp, - strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 5, 2.15 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • Strain Annotations
    17
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_4937224
lncRNA gene Chr5:3522861-3530873 (-)
129S1/SvImJ MGP_129S1SvImJ_G0004025
antisense lncRNA gene Chr5:277776-285629 (-)
A/J MGP_AJ_G0004006
antisense lncRNA gene Chr5:167414-175901 (-)
AKR/J MGP_AKRJ_G0003984
antisense lncRNA gene Chr5:155258-164295 (-)
BALB/cJ MGP_BALBcJ_G0003992
antisense lncRNA gene Chr5:402247-409510 (-)
C3H/HeJ MGP_C3HHeJ_G0003939
antisense lncRNA gene Chr5:335508-342789 (-)
C57BL/6NJ MGP_C57BL6NJ_G0004141
antisense lncRNA gene Chr5:542500-551235 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0003622
antisense lncRNA gene Chr5:200686-207876 (-)
CAST/EiJ MGP_CASTEiJ_G0003902
antisense lncRNA gene Chr5:337654-348494 (-)
CBA/J MGP_CBAJ_G0003932
antisense lncRNA gene Chr5:428156-439458 (-)
DBA/2J no annotation
FVB/NJ MGP_FVBNJ_G0003967
antisense lncRNA gene Chr5:222671-230539 (-)
LP/J MGP_LPJ_G0004028
antisense lncRNA gene Chr5:321394-330832 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0003955
antisense lncRNA gene Chr5:239938-250562 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0004135
antisense lncRNA gene Chr5:286865-294399 (-)
PWK/PhJ MGP_PWKPhJ_G0003856
antisense lncRNA gene Chr5:292156-300548 (-)
SPRET/EiJ MGP_SPRETEiJ_G0003801
antisense lncRNA gene Chr5:565990-574502 (-)
WSB/EiJ MGP_WSBEiJ_G0003938
antisense lncRNA gene Chr5:311602-319415 (-)



Homology
less
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
  • cDNA Data
Sequences &
Gene Models
less
  • All Sequences
  • UniProt
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000106588 Ensembl Gene Model | MGI Sequence Detail 8013 C57BL/6J ±  kb
transcript ENSMUST00000197881 Ensembl | MGI Sequence Detail 1232 Not Applicable  
polypeptide Q3TN47 UniProt | EBI | MGI Sequence Detail 35 Not Applicable  
For the selected sequence
Protein
Information
less
  • UniProt
    1 Sequence
Molecular
Reagents
less
  • All nucleic 1
    cDNA 1
References
more
  • Summaries
    All 4
  • Earliest
    J:53168 Bairoch A, et al., SWISS-PROT Annotated protein sequence database. Database Release. 1999;
  • Latest
    J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
Citing These Resources
Funding Information
Warranty Disclaimer & Copyright Notice
Send questions and comments to User Support.
last database update
06/14/2022
MGI 6.19
The Jackson Laboratory