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Trav13d-4 Gene Detail
Summary
  • Symbol
    Trav13d-4
  • Name
    T cell receptor alpha variable 13D-4
  • Synonyms
    Gm17006
  • Feature Type
    gene segment
  • IDs
    MGI:4440515
    NCBI Gene: 639655
  • Alliance
Location &
Maps
more
  • Sequence Map
    Chr14:53310220-53310731 bp, + strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 14, 27.21 cM
Strain
Comparison
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  • Strain Annotations
    9
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_4440515
gene segment Chr14:53310220-53310732 (+)
129S1/SvImJ MGP_129S1SvImJ_G0002551
gene segment Chr14:47289145-47289656 (+)
A/J MGP_AJ_G0002534
gene segment Chr14:46754687-46754965 (+)
AKR/J MGP_AKRJ_G0002504
gene segment Chr14:47921736-48448381 (+)
BALB/cJ MGP_BALBcJ_G0002519
gene segment Chr14:46739514-46739792 (+)
C3H/HeJ no annotation
C57BL/6NJ no annotation
CAROLI/EiJ no annotation
CAST/EiJ no annotation
CBA/J MGP_CBAJ_G0002486
gene segment Chr14:51560521-51560799 (+)
DBA/2J MGP_DBA2J_G0002490
gene segment Chr14:46486697-46491644 (+)
FVB/NJ no annotation
LP/J MGP_LPJ_G0002567
gene segment Chr14:48687955-48688466 (+)
NOD/ShiLtJ no annotation
NZO/HlLtJ MGP_NZOHlLtJ_G0002671
gene segment Chr14:47627548-47628059 (+)
PWK/PhJ no annotation
SPRET/EiJ no annotation
WSB/EiJ no annotation



Homology
less
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
Sequences &
Gene Models
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  • All Sequences
  • RefSeq
  • UniProt
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000096329 Ensembl Gene Model | MGI Sequence Detail 512 C57BL/6J ±  kb
transcript ENSMUST00000196079 Ensembl | MGI Sequence Detail 331 Not Applicable  
polypeptide ENSMUSP00000143340 Ensembl | MGI Sequence Detail 110 Not Applicable  
For the selected sequence
Protein
Information
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  • UniProt
    2 Sequences
  • InterPro Domains
    IPR007110 Immunoglobulin-like domain
    IPR036179 Immunoglobulin-like domain superfamily
    IPR013783 Immunoglobulin-like fold
    IPR013106 Immunoglobulin V-set domain
Molecular
Reagents
less

  • Microarray probesets 1
References
more
  • Summaries
    All 7
  • Earliest
    J:30476 Takagaki Y, et al., T cell receptor-gamma and -delta genes preferentially utilized by adult thymocytes for the surface expression. J Immunol. 1989 Mar 15;142(6):2112-21
  • Latest
    J:164272 Giudicelli V, et al., IMGT/GENE-DB: a comprehensive database for human and mouse immunoglobulin and T cell receptor genes. Nucleic Acids Res. 2005 Jan 1;33(Database issue):D256-61

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
Citing These Resources
Funding Information
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last database update
10/12/2021
MGI 6.17
The Jackson Laboratory