Gm16582 Gene Detail

Summary

• Symbol
  Gm16582
• Name
  predicted gene 16582

• Feature Type
  lncRNA gene
• IDs
  MGI:4415002
  NCBI Gene: 102634844
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr1:74890054-74919112 bp, + strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 1, 38.54 cM

Strain
Comparison

• SNPs within 2kb
  105 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_4415002	lncRNA gene	Chr1:74890054-74919112 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0015102	unclassified non-coding RNA gene	Chr1:75462764-75493666 (+)
A/J	MGP_AJ_G0015075	unclassified non-coding RNA gene	Chr1:72836503-72863676 (+)
AKR/J	MGP_AKRJ_G0015038	unclassified non-coding RNA gene	Chr1:74844054-74876832 (+)
BALB/cJ	MGP_BALBcJ_G0015038	unclassified non-coding RNA gene	Chr1:72894978-72924011 (+)
C3H/HeJ	MGP_C3HHeJ_G0014861	unclassified non-coding RNA gene	Chr1:75191843-75219086 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0015495	unclassified non-coding RNA gene	Chr1:78407199-78435913 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0013241	unclassified non-coding RNA gene	Chr1:68399501-68426125 (+)
CAST/EiJ	MGP_CASTEiJ_G0014416	unclassified non-coding RNA gene	Chr1:74514468-74547259 (+)
CBA/J	MGP_CBAJ_G0014840	unclassified non-coding RNA gene	Chr1:80957665-80987994 (+)
DBA/2J	MGP_DBA2J_G0014933	unclassified non-coding RNA gene	Chr1:72152903-72180654 (+)
FVB/NJ	MGP_FVBNJ_G0014945	unclassified non-coding RNA gene	Chr1:71351407-71378539 (+)
LP/J	MGP_LPJ_G0015016	unclassified non-coding RNA gene	Chr1:76582079-76612307 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0014972	unclassified non-coding RNA gene	Chr1:84336813-84365091 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0015533	unclassified non-coding RNA gene	Chr1:74919240-74948709 (+)
PWK/PhJ	MGP_PWKPhJ_G0014208	unclassified non-coding RNA gene	Chr1:71615414-71644322 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0013997	unclassified non-coding RNA gene	Chr1:74290714-74318391 (+)
WSB/EiJ	MGP_WSBEiJ_G0014520	unclassified non-coding RNA gene	Chr1:74736462-74765282 (+)

Homology

• Gene Tree
  Gm16582
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  11 phenotype references
  

• All Mutations and Alleles
  6
• Chemically induced (other)
  1
• Gene trapped
  3
• Radiation induced
  2
• Genomic Mutations
  3 involving Gm16582
• Find Mice (IMSR)
  0 strains or lines available

Gene Ontology
(GO)
Classifications

Expression

• Assay Results
  706
• cDNA Data
  2

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  23
• RefSeq
  1

• Ensembl
  ENSMUSG00000089964 (Evidence)
• NCBI Gene
  102634844

Representative Sequences			Length	Strain/Species
genomic	102634844	NCBI Gene Model | MGI Sequence Detail	29059	C57BL/6J
transcript	NR_151618	RefSeq | MGI Sequence Detail	1930	ZRU/MplStud

Molecular
Reagents

• All nucleic 2

  cDNA 2

References

• Summaries
  All 18

  Phenotypes 11
• Earliest
  J:134667 Roderick TH, et al., Two radiation-induced chromosomal inversions in mice (Mus musculus). Proc Natl Acad Sci U S A. 1970 Oct;67(2):961-7
• Latest
  J:86696 Zambrowicz BP, et al., Wnk1 kinase deficiency lowers blood pressure in mice: a gene-trap screen to identify potential targets for therapeutic intervention. Proc Natl Acad Sci U S A. 2003 Nov 25;100(24):14109-14