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Smok3a Gene Detail
Summary
  • Symbol
    Smok3a
  • Name
    sperm motility kinase 3A
  • Feature Type
    protein coding gene
  • IDs
    MGI:3693943
    NCBI Gene: 545814
  • Alliance
Location &
Maps
more
  • Sequence Map
    Chr5:138021276-138034665 bp, + strand
  • From NCBI annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 5, 76.93 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    6 from dbSNP Build 142
  • Strain Annotations
    14
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_3693943
protein coding gene Chr5:138021261-138034665 (+)
129S1/SvImJ MGP_129S1SvImJ_G0030252
protein coding gene Chr5:142853014-142855311 (+)
A/J MGP_AJ_G0030218
protein coding gene Chr5:136614996-136670890 (+)
AKR/J MGP_AKRJ_G0023091
protein coding gene Chr17:10629783-10637352 (+)
BALB/cJ MGP_BALBcJ_G0030231
protein coding gene Chr5:137995317-138006694 (+)
C3H/HeJ no annotation
C57BL/6NJ MGP_C57BL6NJ_G0023568
protein coding gene Chr17:11882887-11888823 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0021080
protein coding gene Chr17:9216017-9263512 (+)
CAST/EiJ no annotation
CBA/J MGP_CBAJ_G0029917
protein coding gene Chr5:154057754-154059812 (+)
DBA/2J no annotation
FVB/NJ MGP_FVBNJ_G0030022
protein coding gene Chr5:135716988-135740596 (+)
LP/J MGP_LPJ_G0023069
protein coding gene Chr17:11162929-11181146 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0030054
protein coding gene Chr5:156838140-156859290 (+)
NZO/HlLtJ no annotation
PWK/PhJ MGP_PWKPhJ_G0022150
protein coding gene Chr17:10049982-10062185 (+)
SPRET/EiJ MGP_SPRETEiJ_G0021983
protein coding gene Chr17:10297591-10299536 (+)
WSB/EiJ MGP_WSBEiJ_G0022463
protein coding gene Chr17:11166551-11535110 (+)



Homology
less
Gene Ontology
(GO)
Classifications
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  • All GO Annotations
  • GO References
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell death
cell differentiation
cell population proliferation
cellular component organization
establishment of localization
homeostatic process
immune system process
lipid metabolic process
nucleic acid-templated transcription
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
Interactions
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Sequences &
Gene Models
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Representative SequencesLengthStrain/SpeciesFlank
genomic 545814 NCBI Gene Model | MGI Sequence Detail 13390 C57BL/6J ±  kb
transcript NM_001168602 RefSeq | MGI Sequence Detail 2723 C57BL/6  
polypeptide C0HKC8 UniProt | EBI | MGI Sequence Detail 504 Not Applicable  
For the selected sequence
Protein
Information
less
Molecular
Reagents
less

  • Microarray probesets 2
References
more
  • Summaries
    All 14
    Gene Ontology 1
  • Earliest
    J:58548 Herrmann BG, et al., A protein kinase encoded by the t complex responder gene causes non-mendelian inheritance [see comments]. Nature. 1999 Nov 11;402(6758):141-6
  • Latest
    J:265628 Gaudet P, et al., Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Brief Bioinform. 2011 Sep;12(5):449-62

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
Citing These Resources
Funding Information
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last database update
03/24/2020
MGI 6.15
The Jackson Laboratory