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Shisal2a Gene Detail
Summary
  • Symbol
    Shisal2a
  • Name
    shisa like 2A
  • Synonyms
    Fam159a, OTTMUSG00000008243
  • Feature Type
    protein coding gene
  • IDs
    MGI:3651644
    NCBI Gene: 545667
  • Alliance
Location &
Maps
more
  • Sequence Map
    Chr4:108224974-108240546 bp, - strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 4, 50.47 cM
Strain
Comparison
more
  • SNPs within 2kb
    98 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_3651644
protein coding gene Chr4:108224963-108243980 (-)
129S1/SvImJ MGP_129S1SvImJ_G0028553
protein coding gene Chr4:109101457-109116973 (-)
A/J MGP_AJ_G0028516
protein coding gene Chr4:105174685-105190998 (-)
AKR/J MGP_AKRJ_G0028463
protein coding gene Chr4:107789534-107805721 (-)
BALB/cJ MGP_BALBcJ_G0028535
protein coding gene Chr4:105374179-105390109 (-)
C3H/HeJ MGP_C3HHeJ_G0028249
protein coding gene Chr4:108511350-108526882 (-)
C57BL/6NJ MGP_C57BL6NJ_G0028975
protein coding gene Chr4:113012313-113031060 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0026266
protein coding gene Chr4:100461775-100477488 (-)
CAST/EiJ MGP_CASTEiJ_G0027685
protein coding gene Chr4:106372699-106389498 (-)
CBA/J MGP_CBAJ_G0028218
protein coding gene Chr4:116726033-116744987 (-)
DBA/2J MGP_DBA2J_G0028366
protein coding gene Chr4:104802055-104818004 (-)
FVB/NJ MGP_FVBNJ_G0028334
protein coding gene Chr4:103673802-103689322 (-)
LP/J MGP_LPJ_G0028467
protein coding gene Chr4:109327770-109344554 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0028360
protein coding gene Chr4:121929409-121945971 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0029011
protein coding gene Chr4:108027786-108046326 (-)
PWK/PhJ MGP_PWKPhJ_G0027411
protein coding gene Chr4:103038407-103082382 (-)
SPRET/EiJ MGP_SPRETEiJ_G0027235
protein coding gene Chr4:105369743-105387406 (-)
WSB/EiJ MGP_WSBEiJ_G0027766
protein coding gene Chr4:108205618-108226488 (-)



Homology
more
  • Human Ortholog
    SHISAL2A, shisa like 2A
  • Vertebrate Orthologs
    2
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    SHISAL2A, shisa like 2A
  • Synonyms
    FAM159A, PRO7171, WWLS2783
  • Links
    NCBI Gene ID: 348378
    neXtProt AC: NX_Q6UWV7
    UniProt: Q6UWV7

  • Chr Location
    1p32.3; chr1:52631438-52669120 (+)  GRCh38.p7

Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    14 phenotype references
  • All Mutations and Alleles
    69
  • Chemically induced (other)
    2
  • Gene trapped
    61
  • Radiation induced
    1
  • Targeted
    5
  • Genomic Mutations
    4 involving Shisal2a
  • Find Mice (IMSR)
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
  • GO References
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
  • cDNA Data
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000059816 Ensembl Gene Model | MGI Sequence Detail 15573 C57BL/6J ±  kb
transcript ENSMUST00000053157 Ensembl | MGI Sequence Detail 593 Not Applicable  
polypeptide ENSMUSP00000060463 Ensembl | MGI Sequence Detail 189 Not Applicable  
For the selected sequence
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 3
    cDNA 3

    Microarray probesets 1
References
more
  • Summaries
    All 27
    Gene Ontology 1
    Phenotypes 14
  • Earliest
    J:84714 Nishijima I, et al., Two new balancer chromosomes on mouse chromosome 4 to facilitate functional annotation of human chromosome 1p. Genesis. 2003 Jul;36(3):142-8
  • Latest
    J:161922 Tang T, et al., A mouse knockout library for secreted and transmembrane proteins. Nat Biotechnol. 2010 Jul;28(7):749-55

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
Citing These Resources
Funding Information
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last database update
06/28/2022
MGI 6.20
The Jackson Laboratory