Gm11867 Gene Detail

Summary

• Symbol
  Gm11867
• Name
  predicted gene 11867

• Feature Type
  lncRNA gene
• IDs
  MGI:3650506
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr4:18407349-18891842 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 4, 7.16 cM

Strain
Comparison

• SNPs within 2kb
  2126 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3650506	lncRNA gene	Chr4:18407349-18891842 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0015535	unclassified non-coding RNA gene	Chr4:15393712-15896051 (+)
A/J	MGP_AJ_G0015512	unclassified non-coding RNA gene	Chr4:14968955-15435977 (+)
AKR/J	MGP_AKRJ_G0015476	unclassified non-coding RNA gene	Chr4:15256448-15757464 (+)
BALB/cJ	MGP_BALBcJ_G0015474	unclassified non-coding RNA gene	Chr4:14913597-15400324 (+)
C3H/HeJ	MGP_C3HHeJ_G0015297	unclassified non-coding RNA gene	Chr4:15393999-15879237 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0015928	unclassified non-coding RNA gene	Chr4:16002345-16545401 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0013663	unclassified non-coding RNA gene	Chr4:13908323-14325587 (+)
CAST/EiJ	MGP_CASTEiJ_G0014851	unclassified non-coding RNA gene	Chr4:15214883-15683178 (+)
CBA/J	MGP_CBAJ_G0015278	unclassified non-coding RNA gene	Chr4:16462519-16996318 (+)
DBA/2J	MGP_DBA2J_G0015372	unclassified non-coding RNA gene	Chr4:14751255-15227976 (+)
FVB/NJ	MGP_FVBNJ_G0015379	unclassified non-coding RNA gene	Chr4:14522405-14988493 (+)
LP/J	MGP_LPJ_G0015451	unclassified non-coding RNA gene	Chr4:15417451-15926323 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0015403	unclassified non-coding RNA gene	Chr4:17290335-17924423 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0015969	unclassified non-coding RNA gene	Chr4:15165502-15665458 (+)
PWK/PhJ	MGP_PWKPhJ_G0014637	unclassified non-coding RNA gene	Chr4:14719274-15177801 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0014425	unclassified non-coding RNA gene	Chr4:15083041-15542562 (+)
WSB/EiJ	MGP_WSBEiJ_G0014957	unclassified non-coding RNA gene	Chr4:15256907-15755640 (+)

Homology

• Gene Tree
  Gm11867
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  1 phenotype reference
  

• All Mutations and Alleles
  1
• Gene trapped
  1
• Find Mice (IMSR)
  0 strains or lines available

Gene Ontology
(GO)
Classifications

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00000087402 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000087402	Ensembl Gene Model | MGI Sequence Detail	484494	C57BL/6J
transcript	ENSMUST00000133363	Ensembl | MGI Sequence Detail	1909	Not Applicable

References

• Summaries
  All 5

  Phenotypes 1
• Earliest
  J:23000 MGD Nomenclature Committee, Nomenclature Committee Use. 1995-02-14;
• Latest
  J:141210 Mouse Genome Informatics (MGI) and National Center for Biotechnology Information (NCBI), Mouse Gene Trap Data Load from dbGSS. Database Download. 2008;